| Intein Name |
Pab VMA |
| Prototype Allele |
Pho VMA |
| Extein Name |
Vacuolar ATPase (H+-transporting ATP synthase), subunit A |
| Intein Class |
Theoretical |
| Organism Name |
Pyrococcus abyssi |
| Organism Description |
Thermophile, strain Orsay, taxon:29292 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K240 |
| Insert Site Comments |
VMA-b, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
429 |
| Intein N-terminal |
AIPGPFGSGK/C |
| Intein C-terminal |
HN/TVTQHQLAKW |
| Accession No. |
D75028 in NCBI/protein, PAB2378 |
| Intein aa Sequence |
>gi|7436316|pir||D75028| Pab VMA intein (including -1 and +1 extein residues)
KCVDGDTLVLTKEFGLIKIKDLYKILDGKGKKTVNGNEEWTELERPITLYGYKDGKIVEIKATHVYKGFS
AGMIEIRTRTGRKIKVTPIHKLFTGRVTKNGLEIREVMAKDLKKGDRIIVAKKIDGGERVKLNIRVEQKR
GKKIRIPDVLDEKLAEFLGYLIADGTLKPRTVAIYNNDESLLRRANELANELFNIEGKIVKGRTVKALLI
HSKALVEFFSKLGVPRNKKARTWKVPKELLISEPEVVKAFIKAYIMCDGYYDENKGEIEIVTASEEAAYG
FSYLLAKLGIYAIIREKIIGDKVYYRVVISGESNLEKLGIERVGRGYTSYDIVPVEVEELYNALGRPYAE
LKRAGIEIHNYLSGENMSYEMFRKFAKFVGMEEIAENHLTHVLFDEIVEIRYISEGQEVYDVTTETHNFI
GGNMPTLLHNT |
| Block A |
CVDGDTLVLTKEF 13 |
| Block B |
GRKIKVTPIHKLFT 93 |
| Block C |
FLGYLIADG 164 |
| Block D |
KLGVPRNK 227 |
| Block E |
FIKAYIMCDG 258 |
| Block H |
TASEEAAYGFSYLLAKLFI 289 |
| Block F |
EVYDVTT***ETHNFI 420 |
| Block G |
MPTLLHNT 430 |
| Initially Contributed by |
Joël Quérellou |
| Contributor's Address |
Ifremer, BP 70
29280 Plouzane
France |
| Contributor's Phone No. |
33 2 98 22 40 01 |
| Contributor's FAX No. |
33 2 99 22 46 00 |
| Contributor's Email address |
Jquerell@ifremer.fr |
| Independently Found By |
|
| Comments |
Motif E uncertain (Quérellou). |
| Date Submitted |
06/26/1999 |
| References |
Lecompte 2001
Cohen 2003 |
