| Intein Name |
Bde-JEL423 eIF-5B |
| Prototype Allele |
Mja IF2 |
| Extein Name |
Eukaryotic translation initiation factor 5B |
| Intein Class |
Theoretical |
| Organism Name |
Batrachochytrium dendrobatidis JEL423 |
| Organism Description |
Chytrid fungus, isolate JEL423, taxon 403673 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K? |
| Insert Site Comments |
IF2-a, eIF-5B-a, same as K418 in Sce eIF-5B (P39730) |
| Intein Size (aa) |
419 |
| Intein N-terminal |
CILGHVDTGK/C |
| Intein C-terminal |
HN/TKLLDKIRQT |
| Accession No. |
AATT01000134 in NCBI/Nucleotide/wgs |
| Intein aa Sequence |
>gi|116294749|gb|AATT01000134.1|[116294749]| Bde-JEL423 eIF-5B intein (including -1 and +1 extein residues)
KCFGRDTPLLMADGTTKFVQDIKALDQLMGDDCTPRIVQERSLVHESGAL
YRVVPKNANGHDAFVCNKEHILVMVNVKQPWVSQTVIDGVDQFHVSEVVC
IGNIPTVRSSGNFASAVEATKALPAWTLLIWEISVLEYLAVDADLRQHFM
IYKPAGGIEYPTTTNLDIVQHFGAESVPNLEHAVMWCIGLWILLGDVDTA
GNPVLILSGIDHLHPLIKTLHSHSQKLSISFTNQLDEGVADISKPTIIAL
GDKFGLLFKSLGIESAECIPDALLRSSKLHRAALLAGLVEGSNAFSIVKD
TPKHWDISCKNNMIFENIKRLSSSLGLCVDTVTPATITQQVSVKTLQIRI
SGPRMHYVSELISNDSLKTTSVVSIDSWLNVKSNACEFEIESIGCGEYFG
FTVMGPNSRFLLGDFTVTHNT |
| Block A |
CFGRDTPLLMADG 13 |
| Block B |
HDAFVCNKEHILVM 73 |
| Block C |
CIGLWILLG 195 |
| Block D |
|
| Block E |
|
| Block H |
CKNNMIFENIKRLSSSLGL 326 |
| Block F |
GEYFGFTVMGPNSRFL 410 |
| Block G |
DFTVTHNT 420 |
| Initially Contributed by |
Russell Poulter, Margi Butler, Tim Goodwin |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
timg@sanger.otago.ac.nz |
| Independently Found By |
|
| Comments |
eIF-5B is a member of the IF-2 subfamily of translation factors. |
| Date Submitted |
10/27/2006 |
| References |
|
