| Intein Name |
Hwa PolB-3 |
| Prototype Allele |
Tli Pol-2 |
| Extein Name |
DNA polymerase B (alpha or family B) |
| Intein Class |
Theoretical |
| Organism Name |
Haloquadratum walsbyi DSM 16790 |
| Organism Description |
Halophile, taxon:362976, strain: DSM 16790 = HBSQ001 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
D1437 |
| Insert Site Comments |
pol-c, Pol Motif C |
| Intein Size (aa) |
431 |
| Intein N-terminal |
DLDKSVIYGD/S |
| Intein C-terminal |
HN/TDSVMLELGD |
| Accession No. |
CAJ51833 in NCBI/protein, locus_tag="HQ1705A |
| Intein aa Sequence |
>gi|109625409|emb|CAJ51833.1|[109625409] CAJ51833| Hwa PolB-3 intein (including -1 and +1 extein residues)
DSVTGDRPVVVRDPSDYIQIVPIKLLFEQATAPEQNMRLTADGAPSVNSELPKERRHLDQWEALSLSDTGETEWQPINQI
IRHQTDKEILTLQHEYGESTTTRDHSYITADDGEYVETSPENVDEPLPIPNIASVKTIETIDIYQTLTTDTQAQIGNDTE
PDKWLPSADCIHANDEYVWIGTTDKQQDRDDSTPAIPRYIDLTSDTGHALIRFLAVYLSDWSKSTITTTERGQCLHITGP
QESALKTCAADADQLFTHITPSIAVDAESNTNTVDSGFRCHIPTTLATTLISAFAGHPAHTKQIPSIVYHLPAAEQSLFI
RHLIQAESTPESDGVSGRPQKSDKPILLENEFITTNRELAAGVSMLLTQCGQSYTISKQDTKGAYTIHINNSSSSGCTPT
LTETTHSGYVYDLSVATNQNFVDGLGGLVLHNT |
| Block A |
SVTGDRPVVVRDP 13 |
| Block B |
YGESTTTRDHSYIT 108 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
YVYDLSV**ATNQNFV 421 |
| Block G |
GGLVLHNT 432 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
|
| Independently Found By |
|
| Comments |
Clone requests: <fpf@rzg.mpg.de> |
| Date Submitted |
10/20/2006 |
| References |
Bolhuis 2006 |
