| Intein Name |
Nph PolB-2 |
| Prototype Allele |
Tli Pol-1 |
| Extein Name |
DNA-directed DNA polymerase (alpha or family B) |
| Intein Class |
Theoretical |
| Organism Name |
Natronomonas pharaonis DSM 2160 |
| Organism Description |
taxon:348780 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N1006 |
| Insert Site Comments |
pol-b, Pol Motif B |
| Intein Size (aa) |
409 |
| Intein N-terminal |
QQSAVKVIMN/C |
| Intein C-terminal |
GQ/SLYGVLGWDR |
| Accession No. |
YP_326412 in NCBI/protein, NP1508A, GeneID:3703042 |
| Intein aa Sequence |
>gi|76801404|ref|YP_326412.1|[76801404] Nph PolB-2 intein (including -1 and +1 extein residues)
NCFTPDTEVLTPDGVRNIRALDIGDEVYSLDPETMEMEVKPVVDTHAYPDYRGELVDIQTGEIDFRVTPNHRMLVRKNGT
NGITDDEYRFVEAGALDLATTYELPHDWAGPDGEDVTQIDLTELIDEEYEVWVRPEVHGRTFTAELGWKPRRVPKADIDT
VGYVFTADEFKQHREYIESVCEQSYIRRESGLKWIPRVYDGDDFLELLAWYVTEGNAHTSERKEFDGQRHGSSTVQIAQE
PVVADGGDTHATIGTLLDRMGFDYDNDNGSYQVTSKLLGDLFCTLGGGGSEDKRIPQLVFEASRRQKERFMQTLISGDGD
RQPNSWQYNTASERLRDDVLRLCAHLGVPASYSEESGVYRIYVTEDGTNTLRMDRSAERTTADDGVYCVTVEDNHTLLAG
RAGKFQFVGQS |
| Block A |
CFTPDTEVLTPDG 13 |
| Block B |
EIDFRVTPNHRMLV 74 |
| Block C |
LLAWYVTEG 214 |
| Block D |
DKRIPQLV 298 |
| Block E |
FMQTLISGDG 318 |
| Block H |
|
| Block F |
GVYCVTV**EDNHTLL 397 |
| Block G |
KFQFVGQS 410 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
|
| Date Submitted |
10/27/2005 |
| References |
Falb 2005 |
|
