| Intein Name |
Mja rPol A'' |
| Prototype Allele |
Mja rPol A'' |
| Extein Name |
DNA-directed RNA polymerase subunit A'' |
| Intein Class |
Theoretical |
| Organism Name |
Methanococcus jannaschii (Methanocaldococcus jannaschii DSM 2661) |
| Organism Description |
Thermophile, DSM 2661, taxon:2190 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
M75 |
| Insert Site Comments |
rPol A''-a |
| Intein Size (aa) |
471 |
| Intein N-terminal |
QSIGEPGTQM/S |
| Intein C-terminal |
HN/TMRTFHYAGV |
| Accession No. |
B64430 in NCBI/protein, MJ1043 |
| Intein aa Sequence |
>gi|2127865|pir||B64430| Mja rPol A" intein (including -1 and +1 extein
residues)
MSLPYEEKIIIKEGEFIKPVEIGKLVDEMIERFGFEKIGNSEVCDLPIDIYALSLDQDEKVHWKRIISCI
RHKHNGKLIKIKTKSGREITATPYHSFVIRKDNKIIPVKGSELKIGDRIPVVKHIPANCVEAINISDYVS
GNYVVDNINNKIAPKINGKSIPNNIKLDYDFGYFIGIYLAEGSVTKYFVSISNVDELILNKIRAFADKLG
LNYGEYDNNNGFAESHDIRIYSSTLAEFLSNFGTSSNTKKIAEFVFGANKEFVRGLIRGYFDGDGNVNAD
RKVIRVTSNSKELIDGIAILLARFNIFSIKTKTKNQFVLIIPHRYAKKFHEEINFSVEKKKSELERLVSS
LNDDKTYDSIDMIPSIGDALTKLGEKVDYPKVILKKFERKQKIGRATLQRHLRRIEELAVKKGVNILALK
EYWLLKKAVESDVIWDEIVKIEEISCDKKYVYDISVEGLETFTTFDGVLTHNT |
| Block A |
SLPYEEKIIIKEG 13 |
| Block B |
GREITATPYHSFVI 98 |
| Block C |
FIGIYLAEG 181 |
| Block D |
TKKIAEFV 254 |
| Block E |
LIRGYFDGDG 274 |
| Block H |
SNSKELIDGIAILLARFNI 305 |
| Block F |
YVYDISV**EGLETFT 462 |
| Block G |
DGVLTHNT 472 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
|
| Date Submitted |
|
| References |
Bult 1996 |
