| Intein Name |
Sda VMA |
| Prototype Allele |
Sce VMA |
| Extein Name |
Vacuolar ATPase (H+-transporting ATP synthase), subunit A |
| Intein Class |
Theoretical |
| Organism Name |
Saccharomyces dairenensis, strain CBS 421 |
| Organism Description |
Yeast, taxon:27289, Also in Sda strain IFO0211 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
G18? |
| Insert Site Comments |
VMA-a |
| Intein Size (aa) |
501 |
| Intein N-terminal |
SNSDTIIYVG/C |
| Intein C-terminal |
HN/CGERGNEMAE |
| Accession No. |
CAC86346.1 in NCBI/protein |
| Intein aa Sequence |
>gi|27528474|emb|CAC86346.1|[27528474] Sda VMA intein (including -1 and +1 extein residues)
GCFAKGTQVMMADGSDKSIEEIQIGEQVMGKDGNPRTVIALPRGKETMYEVCHITPHRTT
SGENFGVMDYVCSGNHKLVLRTPQNVTLTTHELDGQTYTNVSYFALEESAYGQIVXKKTK
SYQHQRHGGKQETEKKVNEFLATINPDSIEWDVEAKDYKKLGYNVKKSSHQMINPVFKES
GNLIAKLNELGFSKEIAPQMGWLLGFWVGNGSITTSSFSIDSLDTQLLDRITEYGKLFAL
TTTSATNHCRNYSGSGNQDIELSKINNGKVETDGTITFDDDTEREPSEQELIDMESSGCK
ASSEMTVALGAPLVRGNAIRQLLTENNVFLKLIESFGVRKENGSEYVKAIPMHLSYDDIE
VREQFIAGLVDSIGHVKRTSNGTIECAAISTAYKSVSEGLIRLARSLGIKVSVTTKRECL
DKHNVKHQICYSICLSGATLSGALRFCALDKNNANSKKPFVRGPVPFYFTLKEKDEDNYY
GITLPDSTDKQYLLSSLALVHNC |
| Block A |
CFAKGTQVMMADG 13 |
| Block B |
VMDYVCSGNHKLVL 79 |
| Block C |
LLGFWVGNG 210 |
| Block D |
VKAIPMHL 353 |
| Block E |
FIAGLVDSIG 373 |
| Block H |
TAYKSVSEGLIRLARSLGI 408 |
| Block F |
YGITLP**DSTDKQYL 492 |
| Block G |
SLALVHNC 502 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
Koufopanou V., Biology, Imperial College at Silwood Park, Ascot, Berks, SL5 7PY, UNITED KINGDOM |
| Comments |
Identical intein in Sda strain IFO0211 (BAC66651) |
| Date Submitted |
04/28/2003 |
| References |
Koufopanou 2002
Okuda 2003 |
