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Ssp-JA3 RIR1 Intein
Intein Name Ssp-JA3 RIR1
Prototype Allele Pfu RIR1-2
Extein Name Ribonucleoside Triphosphate Reductase, RNR, class II
Intein Class Theoretical
Organism Name Synechococcus species JA-3-3Ab
Organism Description Cyanobacterium, Taxon:321327
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein P423
Insert Site Comments RIR1-b
Intein Size (aa) 369
Intein N-terminal HRVQRYGLNP/C
Intein C-terminal HN/CGEIIGCDFH
Accession No. YP_475572 in NCBI/protein, CYA_2169
Intein aa Sequence >gi|86606809|ref|YP_475572.1|[86606809] Ssp-JA3 RIR1 intein (including -1 and +1 extein residues)
PCVTADTWIHTGDGPRQVKDLIGKQHSTYVNGELFSTTPEGFFYSGTKPVLKLVTQEGFSLRLTGNHRVLKVIAQTPKAQ
YTEWVPAEELRPGDRILLHNHRDLTPWDGEGTWEEGWLLGNLLGDGSLATTQGNDTAVLRYGQDTQQERSLHAAQVLQAA
VGYEPRRPETCYHPKLKCWVIHSTGLARLAAKFGMAPGQKQMTAALEATSFDFHRGFLCGLFDADGSVQGGQEKGVSVRL
SQSNLDTLKAVQRMLARLGIVSAIYENRRPAGYRLLPDSKRQPAPYACKVQHELVISGDNLHQFQAVVGFREPRKAQKLG
ELLGSYQRRLNREWFTVTVAALEPDGVEPVYDCTVPGPSCFDANGLVVHNC
Block A CVTADTWIHTGDG 13
Block B GFSLRLTGNHRVLK 70
Block C LLGNLLGDG 125
Block D
Block E FLCGLFDADG 225
Block H QSNLDTLKAVQRMLARLGI 259
Block F PVYDCTV**PGPSCFD 361
Block G NGLVVHNC 370
Initially Contributed by Fran Perler
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Independently Found By
Comments RNR, class II, gene=nrdJ
Date Submitted 04/21/2006
References

Last database update: 11/05/10

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