| Intein Name |
Mja RFC-1 |
| Prototype Allele |
Mja RFC-1 |
| Extein Name |
Replication factor C |
| Intein Class |
Theoretical |
| Organism Name |
Methanococcus jannaschii (Methanocaldococcus jannaschii DSM 2661) |
| Organism Description |
Thermophile, DSM 2661, taxon:2190 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K53 |
| Insert Site Comments |
RFC-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
548 |
| Intein N-terminal |
LFSGPPGVGK/C |
| Intein C-terminal |
HN/TTAALCLARD |
| Accession No. |
E64477 in NCBI/protein, MJ1422 |
| Intein aa Sequence |
>gi|2129234|pir||E64477| Mja RFC-1 intein (including -1 and +1 extein residues)
KCLTGDTKVIVNGEIREIGEVIEEISNGKFGVTLTNNLKVLGIDEDGKIREFDVQYVYKDKTNTLIKIKT
KMGRELKVTTYHPLLINHKNGEIKWEKAENLKVGDKLATPRYILFNESDYNEELAEWLGYFIGDGHADKE
SNKITFTNGDEKLRKRFAELTEKLFKDAKIKERIHKDRTPDIYVNSKEAVEFIDKLGLRGKKADKVRIPK
EIMRSDALRAFLRAYFDCDGGIEKHSIVLSTASKEMAEDLVYALLRFGIIAKLREKVNKNNNKVYYHIVI
SNSSNLRTFLDNIGFSQERKLKKLLEIIKDENPNLDVITIDKEKIRYIRDRLKVKLTRDIEKDNWSYNKC
RKITQELLKEIYYRLEELKEIEKALEENILIDWDEVAERRKEIAEKTGIRSDRILEYIRGKRKPSLKNYI
KIANTLGKNIEKIIDAMRIFAKKYSSYAEIGKMLNMWNSSIKIYLESNTQEIEKLEEIRKTELKLVKEIL
NDEKLIDSIGYVLFLASNEIYWDEIVEIEQLNGEFTIYDLHVPRYHNFIGGNLPTILHNT |
| Block A |
CLTGDTKVIVNGE 13 |
| Block B |
GRELKVTTYHPLLI 85 |
| Block C |
WLGYFIGDG 134 |
| Block D |
KVRIPKEI 211 |
| Block E |
FLRAYFDCDG 229 |
| Block H |
TASKEMAEDLVYALLRFGI 258 |
| Block F |
TIYDLHV**PRYHNFI 538 |
| Block G |
LPTILHNT 549 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
35 kdA subunit of RFC |
| Date Submitted |
|
| References |
Bult 1996
Dalgaard 1997 |
