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Tko RadA Intein
Intein Name Tko RadA
Prototype Allele Pho RadA
Extein Name RadA/Rad51 recombinase
Intein Class Theoretical
Organism Name Thermococcus kodakaraensis KOD1
Organism Description Thermophile, taxon:69014
Domain of Life Archaea
Endonuclease Activity
Endo Motif DOD
Location in Extein K149
Insert Site Comments recA-c, ATP/GTP-binding site motif A (P-loop)
Intein Size (aa) 482
Intein N-terminal EVFGEFGSGK/C
Intein C-terminal HN/TQLAHTLAVM
Accession No. YP_184312 in NCBI/protein, TK1899
Intein aa Sequence >gi|57641834|ref|YP_184312.1|[57641834] Tko RadA intein (including -1 and +1 extein residues)
KCFAKDTKVYYENDTLVHFESIEDMYHKYASLGREVPFDNGYAVPLETVSVYTFDPKTGEVKRTKASYIYREKVEKLAEI
RLSNGYLLRITLLHPVLVFRNGLQWVPAGMIKPGDLIVGIRSVPANAATIEESEAYFLGLFVAEGTSNPLSITTGSEELK
DFIVSFIEDHDGYTPTVEVRRGLYRILFRKKTAEWLGELATSNASTKVVPERVLNAGESAIAAFLAGYLDGDGYLTESIV
ELVTKSRELADGLVFLLKRLGITPRISQKTIEGSVYYRIYITGEDRKTFEKVLEKSRIKPGEMNEGGVGRYPPALGKFLG
KLYSEFRLPKRDNETAYHILTRSRNVWFTEKTLSRIEEYFREALEKLSEARKALEMGDKPELPFPWTAITKYGFTDRQVA
NYRTRGLPKRPELKEKVVSALLKEIERLEGVAKLALETIELARRLEFHEVSSVEVVDYNDWVYDLVIPETHNFIAPNGLV
LHNT
Block A CFAKDTKVYYEND 13
Block B GYLLRITLLHPVLV 97
Block C
Block D
Block E
Block H
Block F WVYDLVI**PETHNFI 473
Block G NGLVLHNT 483
Initially Contributed by Fran Perler
Contributor's Address
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Independently Found By
Comments Formly called Pyrococcus kodakaraensis.
Date Submitted 02/28/2005
References Fukui 2005

Last database update: 11/05/10

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