| Intein Name |
Tko RadA |
| Prototype Allele |
Pho RadA |
| Extein Name |
RadA/Rad51 recombinase |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus kodakaraensis KOD1 |
| Organism Description |
Thermophile, taxon:69014 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K149 |
| Insert Site Comments |
recA-c, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
482 |
| Intein N-terminal |
EVFGEFGSGK/C |
| Intein C-terminal |
HN/TQLAHTLAVM |
| Accession No. |
YP_184312 in NCBI/protein, TK1899 |
| Intein aa Sequence |
>gi|57641834|ref|YP_184312.1|[57641834] Tko RadA intein (including -1 and +1 extein residues)
KCFAKDTKVYYENDTLVHFESIEDMYHKYASLGREVPFDNGYAVPLETVSVYTFDPKTGEVKRTKASYIYREKVEKLAEI
RLSNGYLLRITLLHPVLVFRNGLQWVPAGMIKPGDLIVGIRSVPANAATIEESEAYFLGLFVAEGTSNPLSITTGSEELK
DFIVSFIEDHDGYTPTVEVRRGLYRILFRKKTAEWLGELATSNASTKVVPERVLNAGESAIAAFLAGYLDGDGYLTESIV
ELVTKSRELADGLVFLLKRLGITPRISQKTIEGSVYYRIYITGEDRKTFEKVLEKSRIKPGEMNEGGVGRYPPALGKFLG
KLYSEFRLPKRDNETAYHILTRSRNVWFTEKTLSRIEEYFREALEKLSEARKALEMGDKPELPFPWTAITKYGFTDRQVA
NYRTRGLPKRPELKEKVVSALLKEIERLEGVAKLALETIELARRLEFHEVSSVEVVDYNDWVYDLVIPETHNFIAPNGLV
LHNT |
| Block A |
CFAKDTKVYYEND 13 |
| Block B |
GYLLRITLLHPVLV 97 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
WVYDLVI**PETHNFI 473 |
| Block G |
NGLVLHNT 483 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
|
| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
|
| Independently Found By |
|
| Comments |
Formly called Pyrococcus kodakaraensis. |
| Date Submitted |
02/28/2005 |
| References |
Fukui 2005 |
