New England Biolabs
To access your account, log in or register.
Products Technical Reference Customer Service My NEB Account
Contact NEB About Us Site Map Request a Catalog OEM at NEB ISO International Orders Freezer Program Quick Order
Afu-Af293 PRP8 Intein
Intein Name Afu-Af293 PRP8
Prototype Allele Cne-AD PRP8
Extein Name PRP8, pre-mRNA splicing factor
Intein Class Theoretical
Organism Name Aspergillus fumigatus var. ellipticus, strain Af293
Organism Description Human pathogenic fungus, taxon:330879
Domain of Life Eucarya
Endonuclease Activity
Endo Motif DOD
Location in Extein A1522
Insert Site Comments PRP8-a
Intein Size (aa) 819
Intein N-terminal SWEGLFWERA/C
Intein C-terminal HN/SGFEESMKFK
Accession No. EAL87400 in NCBI/protein,AFUA_2G03030
Intein aa Sequence >gi|83274377|gb|ABC00915.1|[83274377]] Afu-Af293 PRP8 intein (including -1 and +1 extein residues)
ACLAKGTRLLRYDGSEIEVQDVKEGDLLLGPDGGPRRAFNIVNGKDRLYRIKIGGSKEDLVVTPNHILVLHREKRARNVYTGPSVQGHIQRSENGHGNLPMLSSSPAAAHHPNNLVKNRGDFWSALKSAIAWVLHAERSSTGANMVRNVLNGTVGLTAHKESYTVTNPQQKGVYYTYVWGNPQRTSIKGHRDHPPVFLPTKEDAFSAAIAKSRELYSQSEVTLATLRQRFLAKSADGKGGEILVDANLPNIFLLWDKNRSNLKFRVLCSRNFKTYGRVYTFESMPSTNAEEPGYGDDDELPQVSAEERYDTVEMTAAEFASLSTEERSRYRVFRCPGFELPEQPVPVNPYFLGLWLGDDNHEKTTNHNIHEENVREFLVNHAAELDMYLAWQGLIDYATVANPAPMMVRLPPTNPDTIEHRPVVCQARQSIRKLRLAAKNIAQPEVVLSTSPRPESQMQPKRELPSNTETALRSEAEASSISAILDSKAGHSSLDTGDPNSDVVPESIPNDVADFGLDGVPELTSSGFSELTSDSELMRLIEQVERSSQGSTEEPSQASVVEQEADLNLLETDSEDEEADSADDDEFGDPEASEFRPEPESQLSQSHFSNRRRNHRLRTGRRVYGDLNGEEEGILLDQIVEQSEGSRVNSLLRALDALGIIAQKGTGPETNRKHIPSIYMKNSRSVRLAVLAGLIDSDGWYVYPENVLGFAQSERWHSKLFWDVVALARSLGLSVLTKRRMMWNPARTERYPQLFAQISGNVAEVPCLIARKKGVERLIPQTHSFMIKDISLEPEATEWAGFRVDKDQLYLRHDYLVLHNS
Block A CLAKGTRLLRYDG 13
Block B KEDLVVTPNHILVL 69
Block C YFLGLWLGD 357
Block D RKHIPSIY 678
Block E VLAGLIDSDG 698
Block H RWHSKLFWDVVALARSLGL 732
Block F ATEWAGFRVDKDQLYL 810
Block G DYLVLHNS 820
Initially Contributed by Fran Perler
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address
Independently Found By Dhiraj Sharma
Bioinformatics Research Lab.
IBI Biosolutions Pvt. Ltd.
Panchkula - 134109
Haryana, INDIA
dhir.space@gmail.com
Comments
Date Submitted 03/27/2007
References

Last database update: 11/05/10

InBase Home Background Info Splicing mechanism Splicing motifs DOD Endo motifs
Intein registry Intein alleles Selected properties Blast against InBase  
Do you have an intein? Submitting data Bibliography Intein links NEB Home