| Intein Name |
Hwa Pol-II-1 |
| Prototype Allele |
Pho Pol-II |
| Extein Name |
DNA polymerase II, DP2 subunit |
| Intein Class |
Theoretical |
| Organism Name |
Haloquadratum walsbyi DSM 16790 |
| Organism Description |
Halophile, taxon:362976, strain: DSM 16790 = HBSQ001 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD? |
| Location in Extein |
N966 |
| Insert Site Comments |
pol_II-a |
| Intein Size (aa) |
529 |
| Intein N-terminal |
PYFHAAKRRN/C |
| Intein C-terminal |
KQ/CDGDEDCVML |
| Accession No. |
CAJ53557 in NCBI/protein, locus_tag="HQ3461A" |
| Intein aa Sequence |
>gi|109627078|emb|CAJ53557.1|[109627078] Hwa Pol-II-1 intein (including -1 and +1 extein residues)
NCFHPETKIWFRDTDNEWHHETIQTFVEDRLDDPEIDAVGTLVQEVDDNTDREISVPSIDDNGNERLQSVTAVSKHRAPN
HLVQIETISGREITITPDHEMHIFEQGNLVSKQASKITSGEYAVIPKRLQTISPSSHTPQHDLLREFLTRDELTADRLII
HTSDPVRLCNRVFPEEVTSCKDAVEIMQNTACHLDKNKETLIGWLGEGRIPVALLRGFVETDEALLMSIPDDVQIGLRGE
KVRIDRHIGFTEELTSLLGYYAAAGIVHTQTNPISYESAQQEQSRITFYNIDTQTQTDLLNALNSVFEIEPIQYNLDGEI
LGVPGELIRRVFDTVFDVGTQPSHKRIPQALFDASESHITSYLRCFFSTHDSLTTDTRDISATTVSREFKEDIIAALRRL
GITAEVTTQQSRSVPEVLPDWYAIDDITHHDADNSLNLTRSYVISIASSDAVTLQRDRQAQEQIKYDAQGLIANNNAIHQ
SRQVTDGGRKDYITEPITDIEYVDADIDYTYCLTVSETHSLIVNDLSQKQC |
| Block A |
CFHPETKIWFRDT 13 |
| Block B |
GREITITPDHEMHI 102 |
| Block C |
LLGYYAAAG 264 |
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
YTYCLTV**SETHSLI 521 |
| Block G |
NDLSQKQC 530 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
|
| Independently Found By |
|
| Comments |
Clone requests: <fpf@rzg.mpg.de> |
| Date Submitted |
10/20/2006 |
| References |
Bolhuis 2006 |
