| Intein Name |
Tba Pol-II |
| Prototype Allele |
Pho Pol-II |
| Extein Name |
DNA polymerase II, DP2 subunit, PolC_DP2 |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus barophilus MP |
| Organism Description |
taxon:391623 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N951 |
| Insert Site Comments |
pol_II-a |
| Intein Size (aa) |
475 |
| Intein N-terminal |
PYYHAAKRRN/C |
| Intein C-terminal |
SN/CDGDEDAVML |
| Accession No. |
EDY41823.1 in NCBI/protein, locus_tag="TERMP_1671" |
| Intein aa Sequence |
>EDY41823.1 GI:197629280 | Tba Pol-II intein (including -1 and +1 extein residues)
NCFPGDTRILVQLNGMPQRITLRELYELFEEESYENMAYVRKKPKVDIKVYSFDEESGKVVLTDIEDVIKLPSTDHLIRF
ELELGRSFETTVDHPVLVYENGRFIKKRAFEVKEGDLILVPKIEFPEEDIDSIDLLEEFSKDEFKELRERIMVRGIAEWL
MKIGAEVNPDYIRRNSIPLAVLLEVLKEKGLSIKDVPDCYIGFKPDHVKIRRFVPIGPLLRLIGYYLAEGYARESDSVYQ
ISFSNGDEEVREDIKRALRKAFGDGFGIYERGEKITVGSRVIYLLFTRVLKIGKGAKDKRVPAFVFKLPKEKVRHLLQAY
FEGDGTAIKSRPMIVVYSVNKPLLEDIDTLMIAKFNLYASWGVDKNANSRPGNIVQRYHEHRGRRVPVSTVYRLDYYGIQ
AKRFFEEIDFISERKNSVVNAWTNHKFQPYRRANEMGILVRVRRVEYVKPPEEWVYSLSVAKYHTVIVSDNITTSNC |
| Block A |
CFPGDTRILVQLN 13 |
| Block B |
GRSFETTVDHPVLV 97 |
| Block C |
LIGYYLAEG 229 |
| Block D |
|
| Block E |
RALRKAFGDG 324 |
| Block H |
|
| Block F |
WVYSLSVA**KYHTVI 466 |
| Block G |
DNITTSNC 476 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
|
| Date Submitted |
10/31/2008 |
| References |
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