| Intein Name |
Tko Pol-II |
| Prototype Allele |
Pho Pol-II |
| Extein Name |
DNA polymerase II, DP2 subunit |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus kodakaraensis KOD1 |
| Organism Description |
Thermophile, taxon:69014 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N963 |
| Insert Site Comments |
pol_II-a |
| Intein Size (aa) |
474 |
| Intein N-terminal |
PYYHAAKRRN/C |
| Intein C-terminal |
HQ/CDGDEDAVML |
| Accession No. |
YP_184316 in NCBI/protein, TK1903 |
| Intein aa Sequence |
>gi|57641838|ref|YP_184316.1|[57641838] Tko Pol-II intein (including -1 and +1 extein residues)
NCFPGDTRILVQINGLPQRITLRELYDLFEDERYENMAYVRKKPKADVKVYSFDPESGKVVLTDIEDVIKAPSTDHLIRF
ELELGRSFETTVDHPVLVYENGKFVEKRAFEVREGDRILVPNLKLPEKNIDYLDLLKEFSREEFAHLHDRIMVRGIAEWL
RSVEADVKEDYLRRDSIPLSVLLRVLTEKEISIEEVPSCWLGFKRDKVRIKRFVPLKPLLRVVGYYLAEGYARESKSVYQ
LSFSMAEKEVREDLKRALREAFGDGFGIYERGGKVTVGSRILYLLFTEVLKAGKNAYSKRVPSLVFTLPREAVAEMLKAY
FEGDGSALKSVPRVVAYSVNKALLEDIETLLLAKFGIRGYYTFDNNANRGNARGRLYHVERGTEAPVSKVYALNIAGEHY
HRFFNSIGFVSERKNSIYELHAEKSPAQDRYSSQNGWLVKVRRIEYITPKDDFVFSLNAKKYHNVIINESIVTHQC |
| Block A |
CFPGDTRILVQIN 13 |
| Block B |
GRSFETTVDHPVLV 97 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
FVFSLNA**KKYHNVI 465 |
| Block G |
ESIVTHQC 475 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
|
| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
|
| Comments |
Formly called Pyrococcus kodakaraensis. |
| Date Submitted |
02/28/2005 |
| References |
Fukui 2005 |
