Intein Name |
Sex-IFO1128 VMA |
Prototype Allele |
Sce VMA |
Extein Name |
Vacuolar ATPase (H+-transporting ATP synthase), subunit A |
Intein Class |
Theoretical |
Organism Name |
Saccharomyces exiguus, strain="IFO1128" |
Organism Description |
Yeast, taxon:34358 |
Domain of Life |
Eucarya |
Endonuclease Activity |
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Endo Motif |
DOD |
Location in Extein |
G267? |
Insert Site Comments |
VMA-a |
Intein Size (aa) |
499 |
Intein N-terminal |
SNSDAIIYVG/C |
Intein C-terminal |
HN/CGERGNEMAE |
Accession No. |
BAC66652 in NCBI/protein, gene=VMA1-1 |
Intein aa Sequence |
>gi|29420861|dbj|BAC66652.1|[29420861] Sex-IFO1128 VMA intein (including -1 and +1 extein residues)
GCFAKGTQVMMADGSDKSIEDIQLGENVMGKDGTPRTVISLPRGKETMYEVCHSSTKGTTKDTLMNYVCSGNHKIVMQTP
QQIGITEHGIDGKTYTSVSYFALRDSQHGYPIVKKLTKSFEHQQHGGKEQTLITVNNFVSSLKSEPINWDVEAKHYESLG
HYVKKCSYQLINPVFHQSGKLAQEIASLNYSKDKAPLLAWLIGFWVGNGAMRHSQFVVESQDIELVNRIQDIAGLLNLSA
TTACYYSGSKDDEAKLAKLNSSSAEGFEDDLEGNPSVKELADMDRLSESKTATLPTAFGVENIDELIISLGEGRGNGNVF
AQVIGSFGIDLADKDTLVTKIAHELAGDAFEVREQFVAGLVDAAGYVRKDVYDHASEATISTESKSTVLGLVKIARSLGI
KITVTSDDSDDSDEHDHAHCGHDHGSSSSYTAVMTGDALTNSMRFCAIGRNRVAAKEFMRQAVPFYFSLEKKSEDDYYGI
TVPDNTDKQYLLSSMALVHNC |
Block A |
CFAKGTQVMMADG 13 |
Block B |
LMNYVCSGNHKIVM 76 |
Block C |
LIGFWVGNG 208 |
Block D |
VTKIAHEL 344 |
Block E |
FVAGLVDAAG 364 |
Block H |
TESKSTVLGLVKIARSLGI 399 |
Block F |
YGITVP**DNTDKQYL 490 |
Block G |
SMALVHNC 500 |
Initially Contributed by |
Fran Perler |
Contributor's Address |
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Contributor's Phone No. |
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Contributor's FAX No. |
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Contributor's Email address |
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Independently Found By |
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Comments |
Okuda 2003 reports 2 distinct VMA intein alleles in strains IFO0316 and IFO1128. |
Date Submitted |
10/28/2005 |
References |
Koufopanou 2002
Okuda 2003 |