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Sex-IFO1128 VMA Intein
Intein Name Sex-IFO1128 VMA
Prototype Allele Sce VMA
Extein Name Vacuolar ATPase (H+-transporting ATP synthase), subunit A
Intein Class Theoretical
Organism Name Saccharomyces exiguus, strain="IFO1128"
Organism Description Yeast, taxon:34358
Domain of Life Eucarya
Endonuclease Activity
Endo Motif DOD
Location in Extein G267?
Insert Site Comments VMA-a
Intein Size (aa) 499
Intein N-terminal SNSDAIIYVG/C
Intein C-terminal HN/CGERGNEMAE
Accession No. BAC66652 in NCBI/protein, gene=VMA1-1
Intein aa Sequence >gi|29420861|dbj|BAC66652.1|[29420861] Sex-IFO1128 VMA intein (including -1 and +1 extein residues)
GCFAKGTQVMMADGSDKSIEDIQLGENVMGKDGTPRTVISLPRGKETMYEVCHSSTKGTTKDTLMNYVCSGNHKIVMQTP
QQIGITEHGIDGKTYTSVSYFALRDSQHGYPIVKKLTKSFEHQQHGGKEQTLITVNNFVSSLKSEPINWDVEAKHYESLG
HYVKKCSYQLINPVFHQSGKLAQEIASLNYSKDKAPLLAWLIGFWVGNGAMRHSQFVVESQDIELVNRIQDIAGLLNLSA
TTACYYSGSKDDEAKLAKLNSSSAEGFEDDLEGNPSVKELADMDRLSESKTATLPTAFGVENIDELIISLGEGRGNGNVF
AQVIGSFGIDLADKDTLVTKIAHELAGDAFEVREQFVAGLVDAAGYVRKDVYDHASEATISTESKSTVLGLVKIARSLGI
KITVTSDDSDDSDEHDHAHCGHDHGSSSSYTAVMTGDALTNSMRFCAIGRNRVAAKEFMRQAVPFYFSLEKKSEDDYYGI
TVPDNTDKQYLLSSMALVHNC
Block A CFAKGTQVMMADG 13
Block B LMNYVCSGNHKIVM 76
Block C LIGFWVGNG 208
Block D VTKIAHEL 344
Block E FVAGLVDAAG 364
Block H TESKSTVLGLVKIARSLGI 399
Block F YGITVP**DNTDKQYL 490
Block G SMALVHNC 500
Initially Contributed by Fran Perler
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Independently Found By
Comments Okuda 2003 reports 2 distinct VMA intein alleles in strains IFO0316 and IFO1128.
Date Submitted 10/28/2005
References Koufopanou 2002
Okuda 2003

Last database update: 11/05/10

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