New England Biolabs
To access your account, log in or register.
Products Technical Reference Customer Service My NEB Account
Contact NEB About Us Site Map Request a Catalog OEM at NEB ISO International Orders Freezer Program Quick Order
Ssp-PCC7002 DnaE-c Intein
Intein Name Ssp-PCC7002 DnaE-c
Prototype Allele Ssp DnaE-c
Extein Name DnaE pol subunit, DNA polymerase III alpha subunit
Intein Class Experimental
Organism Name Synechocystis species, strain PCC 7002
Organism Description Cyanobacterium, taxon: 32049
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif None
Location in Extein None
Insert Site Comments dnaE-a, Beta and tau binding domains
Intein Size (aa) 36
Intein N-terminal FDQMVKFAEY/C
Intein C-terminal AN/CFNKSHSTAY
Accession No. YP_001735617.1 in NCBI/protein,/locus_tag="SYNPCC7002_A2384", A2384 in Cyanobase
Intein aa Sequence >YP_001735617.1 GI:170078979 | Ssp-PCC7002 DnaE-c C-terminal intein fragment (including +1 extein residue)
Block A
Block B
Block C None
Block D None
Block E None
Block H None
Initially Contributed by Gerrit Volkmann
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address
Independently Found By
Comments The genome of Synechococcus ssp. PCC7002 seems devoid of any other inteins found frequently in cyanobacteria (e.g. in dnaB, gyrB or dnaX genes)(GV).
Date Submitted 04/10/2010

Last database update: 11/05/10

InBase Home Background Info Splicing mechanism Splicing motifs DOD Endo motifs
Intein registry Intein alleles Selected properties Blast against InBase  
Do you have an intein? Submitting data Bibliography Intein links NEB Home