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Pma-ExH1 DnaE Intein
Intein Name Pma-ExH1 DnaE
Prototype Allele Ter DnaE-1
Extein Name DnaE pol subunit, DNA polymerase III alpha subunit
Intein Class Theoretical
Organism Name Persephonella marina EX-H1
Organism Description Taxon:123214
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein L695
Insert Site Comments dnaE-d
Intein Size (aa) 409
Intein N-terminal KEILEETYGL/C
Intein C-terminal HN/CIYQEQIMFM
Accession No. YP_002730690.1 in NCBI/protein,/locus_tag="PERMA_0903"
Intein aa Sequence >YP_002730690.1 GI:225850456 | Pma-ExH1 DnaE intein (including -1 and +1 extein residues)
LCLTGDTLITMADGSRKTIKEIVENDLIDEEILTLDLSDNGLKKGKITHCFDNGIKDVYKITLQNGLEIKATADHKFLTP
FGWKTVRELQAEKDLLAVPVNVDVEGEESDEDKLRVLAYLLADGYLAKSSISFVNKDKTLIEAFKVSVERAFDNVSFKEF
LRARDVWNIYIVSKERNRYHSNPLINWFKELGLFHKKSEEKFIPEFVFKLNKESISKFLAYYWDCDGYIGEKLAHIKTIS
KDLAYGLYYLLLRLGIKANIYKSYYDDKTSYQVTVYDLKNFKKYILPHMISQKARNLTREVSDNSFYLKDIALEKVKAFC
EENGISQREFSRLTGIQRNNFFNGKQQFIKSSVIEKIAPVIEDEELLKLMDGDIGFVPIREIEYAGKEHVYDIEVEGTHN
FIANNIISHNC
Block A CLTGDTLITMADG 13
Block B GLEIKATADHKFLT 78
Block C LLADGYLAK 127
Block D EKFIPEFV 206
Block E FLAYYWDCDG 226
Block H TISKDLAYGLYYLLLRLGI 255
Block F HVYDIEV**EGTHNFI 401
Block G NNIISHNC 410
Initially Contributed by AZHWAR RAGHUNATH & DHAMODHARAN BAKKIYARAJ
Contributor's Address Department of Biotechnology,
Alagappa University Karaikudi - 630 003
Tamilnadu
INDIA
Contributor's Phone No. +91-9944310533
Contributor's FAX No.
Contributor's Email address raghu_lifescience@hotmail.com
Independently Found By
Comments Although present in DnaE, this intein is most similar to DnaB inteins (FP).
Date Submitted 12/06/2009
References Reysenbach, A. L. et al., 2009
J. Bacteriol. 191 (6), 1992-1993 (2009)

Last database update: 11/05/10

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