| Intein Name |
Pma-ExH1 DnaE |
| Prototype Allele |
Ter DnaE-1 |
| Extein Name |
DnaE pol subunit, DNA polymerase III alpha subunit |
| Intein Class |
Theoretical |
| Organism Name |
Persephonella marina EX-H1 |
| Organism Description |
Taxon:123214 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
L695 |
| Insert Site Comments |
dnaE-d |
| Intein Size (aa) |
409 |
| Intein N-terminal |
KEILEETYGL/C |
| Intein C-terminal |
HN/CIYQEQIMFM |
| Accession No. |
YP_002730690.1 in NCBI/protein,/locus_tag="PERMA_0903" |
| Intein aa Sequence |
>YP_002730690.1 GI:225850456 | Pma-ExH1 DnaE intein (including -1 and +1 extein residues)
LCLTGDTLITMADGSRKTIKEIVENDLIDEEILTLDLSDNGLKKGKITHCFDNGIKDVYKITLQNGLEIKATADHKFLTP
FGWKTVRELQAEKDLLAVPVNVDVEGEESDEDKLRVLAYLLADGYLAKSSISFVNKDKTLIEAFKVSVERAFDNVSFKEF
LRARDVWNIYIVSKERNRYHSNPLINWFKELGLFHKKSEEKFIPEFVFKLNKESISKFLAYYWDCDGYIGEKLAHIKTIS
KDLAYGLYYLLLRLGIKANIYKSYYDDKTSYQVTVYDLKNFKKYILPHMISQKARNLTREVSDNSFYLKDIALEKVKAFC
EENGISQREFSRLTGIQRNNFFNGKQQFIKSSVIEKIAPVIEDEELLKLMDGDIGFVPIREIEYAGKEHVYDIEVEGTHN
FIANNIISHNC |
| Block A |
CLTGDTLITMADG 13 |
| Block B |
GLEIKATADHKFLT 78 |
| Block C |
LLADGYLAK 127 |
| Block D |
EKFIPEFV 206 |
| Block E |
FLAYYWDCDG 226 |
| Block H |
TISKDLAYGLYYLLLRLGI 255 |
| Block F |
HVYDIEV**EGTHNFI 401 |
| Block G |
NNIISHNC 410 |
| Initially Contributed by |
AZHWAR RAGHUNATH & DHAMODHARAN BAKKIYARAJ |
| Contributor's Address |
Department of Biotechnology,
Alagappa University Karaikudi - 630 003
Tamilnadu
INDIA |
| Contributor's Phone No. |
+91-9944310533 |
| Contributor's FAX No. |
|
| Contributor's Email address |
raghu_lifescience@hotmail.com |
| Independently Found By |
|
| Comments |
Although present in DnaE, this intein is most similar to DnaB inteins (FP). |
| Date Submitted |
12/06/2009 |
| References |
Reysenbach, A. L. et al., 2009
J. Bacteriol. 191 (6), 1992-1993 (2009) |
