Intein Name |
Pbl PRP8-b |
Prototype Allele |
Cne-AD PRP8 |
Extein Name |
PRP8, pre-mRNA splicing factor |
Intein Class |
Theoretical |
Organism Name |
Phycomyces blakesleeanus |
Organism Description |
Zygomycete fungus, strain NRRL155 |
Domain of Life |
Eucarya |
Endonuclease Activity |
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Endo Motif |
None |
Location in Extein |
A1512 |
Insert Site Comments |
PRP8-a |
Intein Size (aa) |
198 |
Intein N-terminal |
SWLGLFWEKA/C |
Intein C-terminal |
HN/SGFEESMKYK |
Accession No. |
Scaffold 30, contig 5 of Phycomyces genome assembly at JGI |
Intein aa Sequence |
>Scaffold 30, contig 5 of Phycomyces genome assembly at JGI| Pbl PRP8-b intein (including -1 and +1 extein residues)
ACFAGDTFLLLADGNVKLARDITTKDQFMGDDGSPRTILECVDGVAPLYKVIPVSGEALEVTGNHILCLTTTSKSSLVWS
DEDKIYTLRWFSDQKGAQEFTTDSLQVVTDLVDSLEEDVSAKEQEYFSEMTVREYMALPQTFQNTWLMYRAEPEVTKHNQ
AMVVAIKAVELVPEPQTYYGFRIDGNQRFLRYDGLVVHNS |
Block A |
CFAGDTFLLLADG 13 |
Block B |
GEALEVTGNHILCL 68 |
Block C |
None |
Block D |
None |
Block E |
None |
Block H |
None |
Block F |
PQTYYGFRIDGNQRFL 189 |
Block G |
DGLVVHNS 199 |
Initially Contributed by |
Tim Goodwin, Margi Butler, Russell Poulter |
Contributor's Address |
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Contributor's Phone No. |
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Contributor's FAX No. |
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Contributor's Email address |
timg@sanger.otago.ac.nz |
Independently Found By |
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Comments |
The two Pbl PRP8 inteins are found in the PRP8-a sites of two slightly different PRP8 genes that are apparently from the same strain of Phycomyces blakesleeanus. |
Date Submitted |
02/23/2007 |
References |
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