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Pbl PRP8-b Intein
Intein Name Pbl PRP8-b
Prototype Allele Cne-AD PRP8
Extein Name PRP8, pre-mRNA splicing factor
Intein Class Theoretical
Organism Name Phycomyces blakesleeanus
Organism Description Zygomycete fungus, strain NRRL155
Domain of Life Eucarya
Endonuclease Activity
Endo Motif None
Location in Extein A1512
Insert Site Comments PRP8-a
Intein Size (aa) 198
Intein N-terminal SWLGLFWEKA/C
Intein C-terminal HN/SGFEESMKYK
Accession No. Scaffold 30, contig 5 of Phycomyces genome assembly at JGI
Intein aa Sequence >Scaffold 30, contig 5 of Phycomyces genome assembly at JGI| Pbl PRP8-b intein (including -1 and +1 extein residues)
ACFAGDTFLLLADGNVKLARDITTKDQFMGDDGSPRTILECVDGVAPLYKVIPVSGEALEVTGNHILCLTTTSKSSLVWS
DEDKIYTLRWFSDQKGAQEFTTDSLQVVTDLVDSLEEDVSAKEQEYFSEMTVREYMALPQTFQNTWLMYRAEPEVTKHNQ
AMVVAIKAVELVPEPQTYYGFRIDGNQRFLRYDGLVVHNS
Block A CFAGDTFLLLADG 13
Block B GEALEVTGNHILCL 68
Block C None
Block D None
Block E None
Block H None
Block F PQTYYGFRIDGNQRFL 189
Block G DGLVVHNS 199
Initially Contributed by Tim Goodwin, Margi Butler, Russell Poulter
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address timg@sanger.otago.ac.nz
Independently Found By
Comments The two Pbl PRP8 inteins are found in the PRP8-a sites of two slightly different PRP8 genes that are apparently from the same strain of Phycomyces blakesleeanus.
Date Submitted 02/23/2007
References

Last database update: 11/05/10

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