| Intein Name |
Pbl PRP8-b |
| Prototype Allele |
Cne-AD PRP8 |
| Extein Name |
PRP8, pre-mRNA splicing factor |
| Intein Class |
Theoretical |
| Organism Name |
Phycomyces blakesleeanus |
| Organism Description |
Zygomycete fungus, strain NRRL155 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
None |
| Location in Extein |
A1512 |
| Insert Site Comments |
PRP8-a |
| Intein Size (aa) |
198 |
| Intein N-terminal |
SWLGLFWEKA/C |
| Intein C-terminal |
HN/SGFEESMKYK |
| Accession No. |
Scaffold 30, contig 5 of Phycomyces genome assembly at JGI |
| Intein aa Sequence |
>Scaffold 30, contig 5 of Phycomyces genome assembly at JGI| Pbl PRP8-b intein (including -1 and +1 extein residues)
ACFAGDTFLLLADGNVKLARDITTKDQFMGDDGSPRTILECVDGVAPLYKVIPVSGEALEVTGNHILCLTTTSKSSLVWS
DEDKIYTLRWFSDQKGAQEFTTDSLQVVTDLVDSLEEDVSAKEQEYFSEMTVREYMALPQTFQNTWLMYRAEPEVTKHNQ
AMVVAIKAVELVPEPQTYYGFRIDGNQRFLRYDGLVVHNS |
| Block A |
CFAGDTFLLLADG 13 |
| Block B |
GEALEVTGNHILCL 68 |
| Block C |
None |
| Block D |
None |
| Block E |
None |
| Block H |
None |
| Block F |
PQTYYGFRIDGNQRFL 189 |
| Block G |
DGLVVHNS 199 |
| Initially Contributed by |
Tim Goodwin, Margi Butler, Russell Poulter |
| Contributor's Address |
|
| Contributor's Phone No. |
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| Contributor's FAX No. |
|
| Contributor's Email address |
timg@sanger.otago.ac.nz |
| Independently Found By |
|
| Comments |
The two Pbl PRP8 inteins are found in the PRP8-a sites of two slightly different PRP8 genes that are apparently from the same strain of Phycomyces blakesleeanus. |
| Date Submitted |
02/23/2007 |
| References |
|
