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Tsi-MM739 Pol-1 Intein
Intein Name Tsi-MM739 Pol-1
Prototype Allele Tli Pol-1
Extein Name DNA polymerase (alpha or family B)
Intein Class Theoretical
Organism Name Thermococcus sibiricus MM 739
Organism Description Taxon:604354
Domain of Life Archaea
Endonuclease Activity
Endo Motif DOD
Location in Extein N494
Insert Site Comments pol-b, Pol Motif B
Intein Size (aa) 538
Intein N-terminal RQRAVKLLAN/S
Intein C-terminal HN/SYYGYMGYPK
Accession No. YP_002994326.1 in NCBI protein, /locus_tag="TSIB_0919"
Intein aa Sequence >YP_002994326.1 GI:242398902 | Tsi-MM739 Pol-1 intein (including -1 and +1 extein residues)

NSILPNEWLPIIENEEIKFVKIGEFIDRYMEEQKDRVRTVDNTEVLEVDNLFALSLNRESKESEVKKVRALIRHKYRGKV
YAIGLNSGRKITVTGGHSLFTIRKGEIREVSGAEIKAGDLIVVPKKVKLNEKEVTINIPELILRLPDEATADIVMTIPVK
GRKNFFKGMLRTLRWIFGEESKRIRTFNRYLFHLEKLGFVKLLPRGYEVTDWEGLKIYKQLYEKLVESLRYNGNKREYLV
MFNDIKDVISSFPQKELEEWKIGTLNGFRMDCILKIDENFGKLLGYYVSEGYAGAQKNKTDGISYSVKLYNENPNILGDM
KNAAERFFGKVRVGKNCVSISKKMAYLLMKCLCGVTAENKRIPPIIFNSPEPIRWAFLEAYFAGDGDVHPSKRLRLSTKS
ELLANQLIFFLNSLGVSSVKIGFDSGVYRVYINEDLQFLRTSREKNTYYSNLIPKEILEEIFGRKFQRNITFEKFKEFVD
SGKLDKRKAKLLDFVLNGDIVLDRVKNVKKREYEGYVYDLSVEGNENFLVGFGLLYAHNS
Block A SILPNEWLPIIEN 13
Block B GRKITVTGGHSLFT 100
Block C LLGYYVSEG 290
Block D NKRIPPII 365
Block E FLEAYFAGDG 385
Block H TKSELLANQLIFFLNSLGV 415
Block F YVYDLSV**EGNENFL 528
Block G GLLYAHNS 539
Initially Contributed by SUNTHARAJ GOKULNATH & AZHWAR RAGHUNATH
Contributor's Address Department of Bioinformatics, School of Life Sciences, Bharathidasan University, Tiruchirappalli - 620 024
Tamilnadu
INDIA
Contributor's Phone No. +91-9944310533
Contributor's FAX No.
Contributor's Email address raghu_lifescience@hotmail.com
Independently Found By
Comments
Date Submitted 02/19/2010
References Mardanov 2009

Last database update: 11/05/10

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