| Intein Name |
Tsi-MM739 Pol-1 |
| Prototype Allele |
Tli Pol-1 |
| Extein Name |
DNA polymerase (alpha or family B) |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus sibiricus MM 739 |
| Organism Description |
Taxon:604354 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N494 |
| Insert Site Comments |
pol-b, Pol Motif B |
| Intein Size (aa) |
538 |
| Intein N-terminal |
RQRAVKLLAN/S |
| Intein C-terminal |
HN/SYYGYMGYPK |
| Accession No. |
YP_002994326.1 in NCBI protein, /locus_tag="TSIB_0919" |
| Intein aa Sequence |
>YP_002994326.1 GI:242398902 | Tsi-MM739 Pol-1 intein (including -1 and +1 extein residues)
NSILPNEWLPIIENEEIKFVKIGEFIDRYMEEQKDRVRTVDNTEVLEVDNLFALSLNRESKESEVKKVRALIRHKYRGKV
YAIGLNSGRKITVTGGHSLFTIRKGEIREVSGAEIKAGDLIVVPKKVKLNEKEVTINIPELILRLPDEATADIVMTIPVK
GRKNFFKGMLRTLRWIFGEESKRIRTFNRYLFHLEKLGFVKLLPRGYEVTDWEGLKIYKQLYEKLVESLRYNGNKREYLV
MFNDIKDVISSFPQKELEEWKIGTLNGFRMDCILKIDENFGKLLGYYVSEGYAGAQKNKTDGISYSVKLYNENPNILGDM
KNAAERFFGKVRVGKNCVSISKKMAYLLMKCLCGVTAENKRIPPIIFNSPEPIRWAFLEAYFAGDGDVHPSKRLRLSTKS
ELLANQLIFFLNSLGVSSVKIGFDSGVYRVYINEDLQFLRTSREKNTYYSNLIPKEILEEIFGRKFQRNITFEKFKEFVD
SGKLDKRKAKLLDFVLNGDIVLDRVKNVKKREYEGYVYDLSVEGNENFLVGFGLLYAHNS |
| Block A |
SILPNEWLPIIEN 13 |
| Block B |
GRKITVTGGHSLFT 100 |
| Block C |
LLGYYVSEG 290 |
| Block D |
NKRIPPII 365 |
| Block E |
FLEAYFAGDG 385 |
| Block H |
TKSELLANQLIFFLNSLGV 415 |
| Block F |
YVYDLSV**EGNENFL 528 |
| Block G |
GLLYAHNS 539 |
| Initially Contributed by |
SUNTHARAJ GOKULNATH & AZHWAR RAGHUNATH |
| Contributor's Address |
Department of Bioinformatics, School of Life Sciences, Bharathidasan University, Tiruchirappalli - 620 024
Tamilnadu
INDIA |
| Contributor's Phone No. |
+91-9944310533 |
| Contributor's FAX No. |
|
| Contributor's Email address |
raghu_lifescience@hotmail.com |
| Independently Found By |
|
| Comments |
|
| Date Submitted |
02/19/2010 |
| References |
Mardanov 2009 |
