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Sru DnaB Intein
Intein Name Sru DnaB
Prototype Allele Mle-TN DnaB
Extein Name DnaB helicase
Intein Class Theoretical
Organism Name Salinibacter ruber DSM 13855
Organism Description taxon:309807,strain="DSM 13855; M31"
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein K230
Insert Site Comments dnaB-b,ATP/GTP-binding site motif A (P-loop)
Intein Size (aa) 344
Intein N-terminal IIAARPSMGK/C
Intein C-terminal HN/TAFALASAQN
Accession No. ABC45083 in NCBI/protein, SRU_0026
Intein aa Sequence >gi|83756970|gb|ABC45083.1|[83756970] Sru DnaB intein (including -1 and +1 extein residues)
KCLGKGTPVMMYDGRTKPVEKVEVGDRLMGDDGSPRTVQSLARGREQMYWVRQKRGMDYRVNESHILSLKKSRREGARDR
GSIADISVRDYLDQSDKWKDDNKGFKVAAEFPDQPVPLDPYFLGLWLGDGKSDNARIYTTDEEVITGLQEIAEKRGDTIS
VSDEHRRCPAYLVKSGDRGGAMATRESVQGALRALGVLGDKHIPHLYLGNSRGKRLRLLAGLIDSDGHLNDGHGGTYEIT
QSSEQLARDIKFLCDTLGYRTSLTQKTARISSTGYESEVHRVRFNGNVDEIPVRVERKKASPWTDVRDWRMTGIDVEPDG
VGDYFGFTLDGNGRFLLGDGTVTHNT
Block A CLGKGTPVMMYDG 13
Block B GMDYRVNESHILSL 68
Block C FLGLWLGDG 129
Block D DKHIPHLY 206
Block E LLAGLIDSDG 226
Block H
Block F VGDYFGFTLDGNGRFL 335
Block G DGTVTHNT 345
Initially Contributed by Fran Perler
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Independently Found By
Comments
Date Submitted 04/19/2006
References Mongodin 2005

Last database update: 11/05/10

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