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Mka RFC Intein
Intein Name Mka RFC
Prototype Allele Mja RFC-2
Extein Name Replication factor C
Intein Class Theoretical
Organism Name Methanopyrus kandleri AV19
Organism Description Thermophile, taxon:190192
Domain of Life Archaea
Endonuclease Activity
Endo Motif DOD
Location in Extein A82
Insert Site Comments RFC-b
Intein Size (aa) 305
Intein N-terminal WRDNFLELNA/S
Intein C-terminal HN/SDERGIDVIR
Accession No. AAM01223.1 in NCBI/protein, MK006
Intein aa Sequence >gi|19886265|gb|AAM01223.1|[19886265]MK006| Mka RFC intein (including -1 and +1 extein residues)
ASVSADTPILVRRGGEVLRVTFEDLDSWYFGDRGGEYVDVSDLEVLTVDRNFRVTWARVS
KLIRHRARKILRVHLEDGTIELTGNHAVMVLDEGGLRAVKASEIEEGSFLLSFVAELDEQ
PTDGGTVVTSVGSGSRVSDTTYELPVEVRVELLRELADDGVIEASEDVSVDLAWLARISG
VESRVTDDGVELVWETRTGDLLPADPVLKLVERLESDLVDDLESWVFDGRVSKEAVRKVL
SSVDAKNLRGDARRAYRMLRTLVRSDVHAVKVEDLDVMDYDGYVYDVSVPGNEMFFAGEV
PVLLHNS
Block A SVSADTPILVRRG 13
Block B DGTIELTGNHAVMV 89
Block C ---------
Block D
Block E ELLRELADDG 159
Block H EASEDVSVDLAWLARISGV 180
Block F YVYDVSV**PGNEMFF 295
Block G VPVLLHNS 306
Initially Contributed by Fran Perler
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Independently Found By
Comments Probable partial DOD endonuclease sequence present.
Date Submitted 05/05/2002
References Slesarev 2002

Last database update: 11/05/10

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