| Intein Name |
Mka RFC |
| Prototype Allele |
Mja RFC-2 |
| Extein Name |
Replication factor C |
| Intein Class |
Theoretical |
| Organism Name |
Methanopyrus kandleri AV19 |
| Organism Description |
Thermophile, taxon:190192 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
A82 |
| Insert Site Comments |
RFC-b |
| Intein Size (aa) |
305 |
| Intein N-terminal |
WRDNFLELNA/S |
| Intein C-terminal |
HN/SDERGIDVIR |
| Accession No. |
AAM01223.1 in NCBI/protein, MK006 |
| Intein aa Sequence |
>gi|19886265|gb|AAM01223.1|[19886265]MK006| Mka RFC intein (including -1 and +1 extein residues)
ASVSADTPILVRRGGEVLRVTFEDLDSWYFGDRGGEYVDVSDLEVLTVDRNFRVTWARVS
KLIRHRARKILRVHLEDGTIELTGNHAVMVLDEGGLRAVKASEIEEGSFLLSFVAELDEQ
PTDGGTVVTSVGSGSRVSDTTYELPVEVRVELLRELADDGVIEASEDVSVDLAWLARISG
VESRVTDDGVELVWETRTGDLLPADPVLKLVERLESDLVDDLESWVFDGRVSKEAVRKVL
SSVDAKNLRGDARRAYRMLRTLVRSDVHAVKVEDLDVMDYDGYVYDVSVPGNEMFFAGEV
PVLLHNS |
| Block A |
SVSADTPILVRRG 13 |
| Block B |
DGTIELTGNHAVMV 89 |
| Block C |
--------- |
| Block D |
|
| Block E |
ELLRELADDG 159 |
| Block H |
EASEDVSVDLAWLARISGV 180 |
| Block F |
YVYDVSV**PGNEMFF 295 |
| Block G |
VPVLLHNS 306 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
Probable partial DOD endonuclease sequence present. |
| Date Submitted |
05/05/2002 |
| References |
Slesarev 2002 |
