| Intein Name |
Tko r-Gyr |
| Prototype Allele |
Mja r-Gyr |
| Extein Name |
Reverse gyrase |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus kodakaraensis KOD1 |
| Organism Description |
Thermophile, taxon:69014 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
L960 |
| Insert Site Comments |
top-a, 2 aa before the catalytic Y residue |
| Intein Size (aa) |
489 |
| Intein N-terminal |
LAQDLFEAGL/C |
| Intein C-terminal |
HN/CTYHRTDSTH |
| Accession No. |
YP_182883 in NCBI/protein, TK0470 |
| Intein aa Sequence |
>gi|57640405|ref|YP_182883.1|[57640405] Tko r-Gyr intein (including -1 and +1 extein residues)
LCVTPDTLVSLADGRIMEIKDAVEKSEGNLLSVNGLKPKEAKALKFWEIDWNGPLKVIKLKNGHEIKATPDHGLLVMREG
KLGWVSAKNVREGDYVAFAYNTGHRGRDEYTLLKLMIKLGITDVMVELDEEYFNEKVAPIVRERISTSTKYKYLRRRVLP
LYLLQEWGLDDYEAHVKSLYRQRAGSKPIPNFKLDGRFWYVFGLVLGDGTLRDSKVLISQTPLKDVKSVLEDVFPFLRVF
ETTNQVGFSNSIIAEVFRRLGARKGKLHPLVFGLREEYINAMIAGYFDTDGTFSILNDRKGPNFRGILTSKRGDVLRMLS
VYLYQIGIMNYLRRDERTGVWDLIISNRSLEKFREKIYPYLRIRRAQFDEAYSVYRASRRAFEGDLLPVAPVFGKLKFKN
GTKNRILKETGIDVWNWLKRPEGEIPRDKLSKVLEYAEESPEKEFLKSLVEAGVTWVKVKGVEEELYTGKLYDFTTTTEN
FLSNGAVSHNC |
| Block A |
CVTPDTLVSLADG 13 |
| Block B |
GHEIKATPDHGLLV 75 |
| Block C |
VFGLVLGDG 208 |
| Block D |
GKLHPLVF 271 |
| Block E |
MIAGYFDTDG 290 |
| Block H |
SKRGDVLRMLSVYLYQIGI 327 |
| Block F |
KLYDFTT***TTENFL 481 |
| Block G |
NGAVSHNC 490 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
Formly called Pyrococcus kodakaraensis. |
| Date Submitted |
02/28/2005 |
| References |
Fukui 2005 |
