| Intein Name |
Dra Snf2-n |
| Prototype Allele |
Dra Snf2 |
| Extein Name |
SNF2/Rad54 helicase |
| Intein Class |
Theoretical |
| Organism Name |
Deinococcus radiodurans R1, TIGR strain |
| Organism Description |
Radiation and DNA damage resistent, taxon:1299 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K693 |
| Insert Site Comments |
snf2-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
343 |
| Intein N-terminal |
ILADDMGLGK/A |
| Intein C-terminal |
HN/TLQTLAHLLK |
| Accession No. |
7473921 in NCBI/protein, DR1258 |
| Intein aa Sequence |
>G75417 GI:7473921 DR1258| TIGR sequenced strain| Dra Snf2-n N-TERM intein (including -1 extein residue) fragment
KAQPLDAKVLTPLGWRTMGELQVGDYVIGRNGQPTQIVGVYPQGERPIYRVTLTDGASVE
ADAEHLWNVNTPVRKKRGLPERTLTTAEIAADLQDAAGNLKHYLPLVEPVQFAGRDLPLD
PYTLGALLGDGCFVHGVEITSEDELVSALPLPAGVEARLGTRLTPTVSTSRLVTAGQWTP
NPLKDALRGLGLHGKSGRYKFIPPDYLLGSPAQPAGSAARTPRH |
| Block A |
AQPLDAKVLTPLG 13 |
| Block B |
GASVEADAEHLWNV N68 |
| Block C |
YTLGALLGD N129 |
| Block D |
YKFIPPDY N205 |
| Block E |
|
| Block H |
|
| Block F |
|
| Block G |
|
| Initially Contributed by |
Shmuel Pietrokovski |
| Contributor's Address |
Molecular Genetics Dept.
Weizmann Institute of Science
PO Box 26
Rehovot 76100
Israel |
| Contributor's Phone No. |
972 (8) 934 2747 |
| Contributor's FAX No. |
972 (8) 934 4108 |
| Contributor's Email address |
Shmuel.Pietrokovski@weizmann.ac.il |
| Independently Found By |
|
| Comments |
Intein begins with Ala1. Rad54 related protein. Apparent 1 base insertion results in reading frame shift between Q212 and R213, which is absent in the ATCC13939 type strain intein. |
| Date Submitted |
12/04/1999 |
| References |
White 1999
Makarova 2001
Southworth 2002 |
