| Intein Name |
Tko Helicase |
| Prototype Allele |
Mja Helicase |
| Extein Name |
RNA helicase Ski2 homolog |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus kodakaraensis KOD1 |
| Organism Description |
Thermophile, taxon:69014 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
L331 |
| Insert Site Comments |
helicase-a, Motif V of DEAD and DEAH box helicases |
| Intein Size (aa) |
403 |
| Intein N-terminal |
IKVITATPTL/C |
| Intein C-terminal |
HN/SAGINLPAFR |
| Accession No. |
YP_183745 in NCBI/protein, TK1332 |
| Intein aa Sequence |
>gi|57641267|ref|YP_183745.1|[57641267] Tko Helicase intein (including -1 and +1 extein residues)
LCMHPDTYVVTKSGAKKVSELTEGDEVLTHTGTFKKVIQPLRREHKGRLLVIKAYGTVPVKITPEHMVWVVKQIRHKSHY
SDGRQVIWWEFEGPEWMTAQELKERLESETDPKVSYMLLQPIPEPSVDADKIPLRKEVYVVNQHGKTDKLHPSVKRTPEY
LPLNFETARLIGLWIAEGSTSKNGVIKFDISSNEEDLTEFITGTIRKYFPHAKIVVKDHERNRRTVRFCNKRFAEWLREN
IGHGADNKSIPPLLLLNKNREVRLGLLRGLIEGDGYVRRESQRRANYISYSTVSPSLAYQLQLLVASLGYTSSIHRSIRT
EGIGKTRKPIYDVKVSGKSYYSLLEELGFEVPQRGNRTYNVNRTWKNYLLLKVRSIEEEEYEGDVYNLEVEGDESGSVGF
IVHNS |
| Block A |
CMHPDTYVVTKSG 13 |
| Block B |
TVPVKITPEHMVWV 69 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
DVYNLEV**EGDESYS 396 |
| Block G |
VGFIVHNS 404 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
|
| Independently Found By |
|
| Comments |
Formly called Pyrococcus kodakaraensis. |
| Date Submitted |
02/28/2005 |
| References |
Fukui 2005 |
