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Tko Helicase Intein
Intein Name Tko Helicase
Prototype Allele Mja Helicase
Extein Name RNA helicase Ski2 homolog
Intein Class Theoretical
Organism Name Thermococcus kodakaraensis KOD1
Organism Description Thermophile, taxon:69014
Domain of Life Archaea
Endonuclease Activity
Endo Motif DOD
Location in Extein L331
Insert Site Comments helicase-a, Motif V of DEAD and DEAH box helicases
Intein Size (aa) 403
Intein N-terminal IKVITATPTL/C
Intein C-terminal HN/SAGINLPAFR
Accession No. YP_183745 in NCBI/protein, TK1332
Intein aa Sequence >gi|57641267|ref|YP_183745.1|[57641267] Tko Helicase intein (including -1 and +1 extein residues)
LCMHPDTYVVTKSGAKKVSELTEGDEVLTHTGTFKKVIQPLRREHKGRLLVIKAYGTVPVKITPEHMVWVVKQIRHKSHY
SDGRQVIWWEFEGPEWMTAQELKERLESETDPKVSYMLLQPIPEPSVDADKIPLRKEVYVVNQHGKTDKLHPSVKRTPEY
LPLNFETARLIGLWIAEGSTSKNGVIKFDISSNEEDLTEFITGTIRKYFPHAKIVVKDHERNRRTVRFCNKRFAEWLREN
IGHGADNKSIPPLLLLNKNREVRLGLLRGLIEGDGYVRRESQRRANYISYSTVSPSLAYQLQLLVASLGYTSSIHRSIRT
EGIGKTRKPIYDVKVSGKSYYSLLEELGFEVPQRGNRTYNVNRTWKNYLLLKVRSIEEEEYEGDVYNLEVEGDESGSVGF
IVHNS
Block A CMHPDTYVVTKSG 13
Block B TVPVKITPEHMVWV 69
Block C
Block D
Block E
Block H
Block F DVYNLEV**EGDESYS 396
Block G VGFIVHNS 404
Initially Contributed by Fran Perler
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Independently Found By
Comments Formly called Pyrococcus kodakaraensis.
Date Submitted 02/28/2005
References Fukui 2005

Last database update: 11/05/10

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