| Intein Name |
Pfu RFC |
| Prototype Allele |
Mja RFC-1 |
| Extein Name |
Replication factor C |
| Intein Class |
Theoretical |
| Organism Name |
Pyrococcus furiosus |
| Organism Description |
Thermophile, DSM3638, taxon:186497 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K59 |
| Insert Site Comments |
RFC-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
525 |
| Intein N-terminal |
LFAGPPGVGK/C |
| Intein C-terminal |
HN/TTAALALARE |
| Accession No. |
AAL80216.1 in NCBI/protein, PF0093 |
| Intein aa Sequence |
>gi|18892003|gb|AAL80216.1|[18892003] Pfu RFC intein (including -1 and +1 extein residues)
KCLTGDTKVIANGQLFELGELVEKLSGGRFGPTPVKGLKVLGIDEDGKLREFEVQYVYKDRTDRlIKI
KTQLGRELKVTPYHPLLVNRENGEIKWIKAEELKPGDKLAIPSFLPLITGENPLAEWLGYFMGSGYAY
PSNSVITFTNEDPLIRQRFMELTEKLFPDAKIRERIHADGTPEVYVVSRKAWSLVNSISLTLIPREGW
KGIRSFLRAYSDCNGRIESDAIVLSTDNNDMAQQIAYALASFGIIAKMDGEDVIISGSDNIERFLNEI
GFSTQSKLKEAQKLIRKTNVRSDGLKINYELISYVKDRLRLNVNDKRNlSYRNAKELSWELMKEIYYR
LEELERLKKVLSEPILIDWNEVAKKSDEVIEKAKIRAEKLLEYIKGERKPSFKEYIEIAKVLGINVER
TIEAMKIFAKRYSSYAEIGRKLGTWNFNVKTILESDTVDNVEILEKIRKIELELIEEILSDGKLKEGI
AYLIFLFQNELYWDEITEVKELRGDFIIYDLHVPGYHNFIAGNMPTVVHNT |
| Block A |
CLTGDTKVIANGQ 13 |
| Block B |
GRELKVTPYHPLLV 85 |
| Block C |
WLGYFMGSG 132 |
| Block D |
LTLIPREG 202 |
| Block E |
FLRAYSDCNG 218 |
| Block H |
TDNNDMAQQIAYALASFGI 247 |
| Block F |
IIYDLHV**PGYHNFI 515 |
| Block G |
MPTVVHNT 526 |
| Initially Contributed by |
Dennis Maeder |
| Contributor's Address |
COMB
701 E.Pratt St.
Baltimore MD 21202 |
| Contributor's Phone No. |
410 234-8871 |
| Contributor's FAX No. |
410 234-8896 |
| Contributor's Email address |
maeder@umbi.umd.edu |
| Independently Found By |
|
| Comments |
|
| Date Submitted |
08/28/1998 |
| References |
Maeder 1999 |
