| Intein Name |
Nph PolB-1 |
| Prototype Allele |
Pko Pol-1 |
| Extein Name |
DNA-directed DNA polymerase (alpha or family B) |
| Intein Class |
Theoretical |
| Organism Name |
Natronomonas pharaonis DSM 2160 |
| Organism Description |
taxon:348780 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K518 |
| Insert Site Comments |
pol-a, Pol Motif A |
| Intein Size (aa) |
401 |
| Intein N-terminal |
KEMVSVLDLK/C |
| Intein C-terminal |
GQ/SLYPMCMVTI |
| Accession No. |
YP_326412 in NCBI/protein, NP1508A, GeneID:3703042 |
| Intein aa Sequence |
>gi|76801404|ref|YP_326412.1|[76801404] Nph PolB-1 intein (including -1 and +1 extein residues)
KCFSGDTDVATPDGIKNIQEVAVGDPVYTLNPETFECEIKPVVDTQSYRNKYGELHHVAGRTHDFKVTENHRFLLSETVD
LDSPGPDDYALSEYRELPEYERLAFPNHEPMAGATREEFDLAGAVDDGHAVVCAHDGRSAFRTAMPAGVEAALDRADGTS
QLAATEEKTGTYRIPIDTYRERRDVIDEHADEVLLKYEREDNQIPTGFGMDDWLELVGWFVTAGRFAHEAKRIVLRRQDE
EGRSAIRSLLERMELPYDADGTRVTVSNRVLYDWFVKNCGDGATETRLPEWVFELDAAHLRTLLETLVDGDGSRTDSGLG
EFWTQSDRLKDDVVRLAVRCGEKPTVSENQDGTWYVSVGTRGSMKKSNATVEDHDGDVHCITAEDNHVVLAGRNGHLQWV
GQS |
| Block A |
CFSGDTDVATPDG 13 |
| Block B |
THDFKVTENHRFLL 74 |
| Block C |
DLAGAVDDG 127 |
| Block D |
|
| Block E |
LLETLVDGDG 311 |
| Block H |
TDSGLGEFWTQSDRLKDDV 332 |
| Block F |
EDHDGDVHCITAEDNH 386 |
| Block G |
HLQWVGQS 402 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
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| Date Submitted |
10/27/2005 |
| References |
Falb 2005 |
|
