| Intein Name |
Pab IF2 |
| Prototype Allele |
Mja IF2 |
| Extein Name |
Translation initiation factor |
| Intein Class |
Theoretical |
| Organism Name |
Pyrococcus abyssi |
| Organism Description |
Thermophile, strain Orsay, taxon:29292 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K20 |
| Insert Site Comments |
IF2-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
394 |
| Intein N-terminal |
AVLGHVDHGK/C |
| Intein C-terminal |
HN/TTLLDRIRKT |
| Accession No. |
E75093 in NCBI/protein, PAB0755 |
| Intein aa Sequence |
>gi|7521761|pir||E75093| Pab IF2 intein (including -1 and +1 extein residues)
KCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIRELDERITSVNGDGKTGLVKASYVWKVRHKGK
VIRVKLKNWHGVTVTPEHPFLTTKGWKRADQLRPGDYVAVPRFIHGNEDEKIFLSYVKVKKSGEEWKEYF
YLAGRKGNIDVNLLFVAPKRYVVEFLRGYFEERSEVKGESVIVEARELVEPLSLALLRFGIFSKIQGSKL
IVTGKRNLEAFKDYIGFKDEREKALEEAIEKVKGSEVYPIFEEIRRLRLLFGFTREELGSYAKYENSEAP
TYEELMEILDFIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRNREFDSKDVD
YIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHNT |
| Block A |
CLLPDEKVVVPSV 13 |
| Block B |
WHGVTVTPEHPFLT 91 |
| Block C |
LAGRKGNID 149 |
| Block D |
|
| Block E |
FLRGYFEERS 173 |
| Block H |
VEARELVEPLSLALLRFGI 200 |
| Block F |
YVYDLTT***ETHNFI 386 |
| Block G |
NGILVHNT 395 |
| Initially Contributed by |
Joël Quérellou |
| Contributor's Address |
Ifremer, BP 70
29280 Plouzane
France |
| Contributor's Phone No. |
33 2 98 22 40 01 |
| Contributor's FAX No. |
33 2 99 22 46 00 |
| Contributor's Email address |
Jquerell@ifremer.fr |
| Independently Found By |
|
| Comments |
Motif C uncertain (Quérellou). |
| Date Submitted |
06/26/1999 |
| References |
Lecompte 2001
Cohen 2003 |
