| Intein Name |
Mesp-FS406 PolB-3 |
| Prototype Allele |
Tli Pol-1 |
| Extein Name |
DNA polymerase Pol2,DNA polymerase family B |
| Intein Class |
Theoretical |
| Organism Name |
Methanocaldococcus sp. FS406-22 |
| Organism Description |
Taxon:644281 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N1373 |
| Insert Site Comments |
pol-b, Pol Motif B |
| Intein Size (aa) |
488 |
| Intein N-terminal |
EQKSLKILAN/S |
| Intein C-terminal |
HN/SVYGYLAFPR |
| Accession No. |
ZP_06214852.1 in NCBI protein, /locus_tag="MFS40622DRAFT_1784" |
| Intein aa Sequence |
>ZP_06214852.1 GI:270497887 | Mesp-FS406 PolB-3 intein (including -1 and +1 extein residues)
NSILPNQWMPIVEDNDIKFVKIDNYINQLMDRNKYKIKFDGNSEILEVDNLKAFSFNRQSKKCEIKRVKALIRHKYSGKA
YKIKLRSGREIEVTMGHSLFKYENGKIVEVKGEDVKVDDLIVVPKSIVAIEEDITINIPKVLAKLDDDSLILEIPKEKRN
EIKKKISTIKDKSLRKFYELILKHSKYTKNGNYIIKLSKVKDIIDYIPDKEFINFKIGTRGGKRINAIIKLDEDVAKFLG
YYVSEGYARCSKNQKNGYSYEIYIANHDKDILKDMERVTTKIFDKCKVCKDRVRVMSKIAYLFVNYVVPCGIKAENKQIP
EIIFKAKKSIKLAFLEGYFIGDGDIHPSKRLRLSTKSEKLAYQLMFLLNSLGISAVKIGFDSGVYRVYINEDLPFITTNR
KRNKYYSNVIPKEILEYIFNKKFQNNMSIDKFKEFIKDKDINGFEWLLNGDITFDRVKEIEEFDYNGYVYDLSVEDNENF
LINNIYAHNS |
| Block A |
SILPNQWMPIVED 13 |
| Block B |
GREIEVTMGHSLFK 100 |
| Block C |
FLGYYVSEG 245 |
| Block D |
NKQIPEII 322 |
| Block E |
FLEGYFIGDG 342 |
| Block H |
TKSEKLAYQLMFLLNSLGI 372 |
| Block F |
YVYDLSV**EDNENFL 480 |
| Block G |
NNIYAHNS 489 |
| Initially Contributed by |
SUNTHARAJ GOKULNATH & AZHWAR RAGHUNATH |
| Contributor's Address |
Department of Bioinformatics, School of Life Sciences, Bharathidasan University, Tiruchirappalli - 620 024
Tamilnadu
INDIA |
| Contributor's Phone No. |
+91-9944310533 |
| Contributor's FAX No. |
|
| Contributor's Email address |
raghu_lifescience@hotmail.com |
| Independently Found By |
|
| Comments |
This gene appears to have a duplication of Pol Motif B or is misassembled. |
| Date Submitted |
02/19/2010 |
| References |
|
