| Intein Name |
CroV RIR1 |
| Prototype Allele |
CroV RIR1 |
| Extein Name |
Ribonucleoside- diphosphate reductase, alpha subunit |
| Intein Class |
Theoretical |
| Organism Name |
Cafeteria roenbergensis virus BV-PW1 |
| Organism Description |
taxon:693272, Giant virus infecting marine heterotrophic nanoflagellate |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
Q294 |
| Insert Site Comments |
RIR1-h |
| Intein Size (aa) |
335 |
| Intein N-terminal |
YNSICRYVNQ/C |
| Intein C-terminal |
HN/SGRRKGSFAF |
| Accession No. |
ADO67488 in NCBI/protein, locus_tag="crov454 |
| Intein aa Sequence |
>ADO67488.1 GI:309386628 | CroV RIR1 intein (including -1 and +1 extein residues)
NQCFTPDTPIFTNDGFVSIENIKPHMKVMTSDGTFRNVNKIFKNNVNKNILKINTTHSLEEIKCTKEHDILIYQNINNES
NYEQITHYIETNKYTPNFVKASELKVGDFMVIPKIQINKQTIYSEDDYYLLGLILGKGTIVLNKDYHLMECMLTLDTNSI
SYQFVKNYLTTKNICFSEINNNSIIEWNLPENFIIQYDDLYINDIKYFSSKFITGETNKLLKLIKGLIDSNGNIDREITV
KASNKNMAYSIRYILMILGIPSSGHFTDNYIIKIPKTNMISNILNIEPDNTFNYIELETCILTKIENIDMCEYSGYVYDL
NIEENHNYLTSSGIVHNS |
| Block A |
CFTPDTPIFTNDG 13 |
| Block B |
LEEIKCTKEHDILI 70 |
| Block C |
LLGLILGKG 136 |
| Block D |
|
| Block E |
LIKGLIDSNG 230 |
| Block H |
|
| Block F |
YVYDLNI**EENHNYL 327 |
| Block G |
SSGIVHNS 336 |
| Initially Contributed by |
Matthias G. Fischer |
| Contributor's Address |
University of British Columbia
6339 Stores Road
Vancouver, BC, Canada
V6T 1Z4 |
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
mfischer@eos.ubc.ca |
| Independently Found By |
|
| Comments |
As of Nov 2010, all other matches to this intein in NCBI protein are BILs, such as Avin RIR1 (FP). DOD motifs poorly conserved (FP). |
| Date Submitted |
11/24/2010 |
| References |
Fischer 2010 |
