New England Biolabs
To access your account, log in or register.
Products Technical Reference Customer Service My NEB Account
Contact NEB About Us Site Map Request a Catalog OEM at NEB ISO International Orders Freezer Program Quick Order
CbP-D1873 RNR Intein
Intein Name CbP-D1873 RNR
Prototype Allele CbP-C-St RNR
Extein Name Ribonucleotide reductase, Anaerobic,large subunit, RNR, class III
Intein Class Theoretical
Organism Name Clostridium botulinum phage D
Organism Description Ssp. phage from Clostridium botulinum type D
strain, 1873, taxon:29342
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein C333
Insert Site Comments RNR-c
Intein Size (aa) 330
Intein N-terminal ATSIDALASC/C
Intein C-terminal HN/CRLTSSSKEI
Accession No. BAE53574 in NCBI/protein
Intein aa Sequence >gi|83280998|dbj|BAE53574.1|[83280998] CbP-D1873 RNRintein (including -1 and +1 extein residues)
CCFDGQQKTLTKSSHGVNYLSFKDLYDTKYKDKERRNFKVFHNGNWVEGKPIRLLRNDKKMYKITTVNNKELLVTEDHIN
VTDKGDKYTTQLTENDYIAFNTRPTNAIPEKDEKLTYEQGVLIGAYLGDGSKQRNEHKIQLSINEEKYNILRPLIEKALK
QWNIQAQYKLYTPHNNAYPTAIISEDLLNTIEHWVKGDYSYNKRLNLEILHQSIEFRKGVLDGIYFTDGGNSNRIYTTSD
SLKEDLEILINSLGMVSIINTTDGTDEKMIIRSEEFNRNQKGLYKVINNTMFFKIKTIQQYISNDEYVYCFEMKNIEEPY
FTLPNGVITHNC
Block A CFDGQQKTLTKSS 13
Block B NKELLVTEDHINVT 81
Block C LIGAYLGDG 129
Block D
Block E VLDGIYFTDG 228
Block H TTSDSLKEDLEILINSLGM 254
Block F YVYCFEMKNIEEPYFT 321
Block G NGVITHNC 331
Initially Contributed by Fran Perler
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address
Independently Found By
Comments
Date Submitted 02/13/2007
References Sakaguchi 2005

Last database update: 11/05/10

InBase Home Background Info Splicing mechanism Splicing motifs DOD Endo motifs
Intein registry Intein alleles Selected properties Blast against InBase  
Do you have an intein? Submitting data Bibliography Intein links NEB Home