| Intein Name |
ShP-Sfv-5 Primase |
| Prototype Allele |
ShP-Sfv-5 Primase |
| Extein Name |
DNA primase, Helicase |
| Intein Class |
Theoretical |
| Organism Name |
Shigella flexneri 5 str. 8401 |
| Organism Description |
Bacteriphage,isolation_source_epidemic, taxon:373384 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K371 |
| Insert Site Comments |
primase-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
342 |
| Intein N-terminal |
LVNGVNGHGK/A |
| Intein C-terminal |
HN/TEVVGHMALE |
| Accession No. |
ABF04780 in NCBI/protein, SFV_2689 |
| Intein aa Sequence |
>gi|110616113|gb|ABF04780.1|[110616113] ShP-Sfv-5 Primase intein (including -1 and +1 extein residues)
KACPLNEPILLADGTWTTHGNVKIGDQVASVDGNPSTVTGIFPQGVRDVYRVTFEDGRYVDCAGDHLWEVTSRGFTKGEK
RRVIDTFGLKRLSETKRHKNGVRIPEITGDFGDHSEPLAWVIGSLLGDGSLSNGSVKFSNVEPYMIERMKAELPDYNFSG
DGKDWLISTARGQVNPLMETLRGYGLMGCTAKNKFIPRVFFSANKSTRIGMLCGLLETDGYVEKDGTLVFSSASEELRNG
VVQLVNSLGGSCRTRVKTGVTYTYKDDKQHGMDSYEARIRLTREIREAIRSPRLNGRLTAHRFEGCGVFVRNVEKIGNAE
CLCIMVDHPRHLYVTRGYVATHNT |
| Block A |
ACPLNEPILLADG 13 |
| Block B |
GRYVDCAGDHLWEV 69 |
| Block C |
VIGSLLGDG 128 |
| Block D |
NKFIPRVF 199 |
| Block E |
MLCGLLETDG 219 |
| Block H |
SASEELRNGVVQLVNSLGG 249 |
| Block F |
ECLCIMV*DHPRHLYV 333 |
| Block G |
GYVATHNT 343 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
|
| Date Submitted |
10/23/2006 |
| References |
Nie 2006
Wei 2003 |
|
