New England Biolabs
To access your account, log in or register.
Products Technical Reference Customer Service My NEB Account
Contact NEB About Us Site Map Request a Catalog OEM at NEB ISO International Orders Freezer Program Quick Order
Daud RIR1 Intein
Intein Name Daud RIR1
Prototype Allele Pfu RIR1-2
Extein Name Ribonucleoside- diphosphate reductase, alpha subunit
Intein Class Theoretical
Organism Name Candidatus Desulforudis audaxviator MP104C
Organism Description taxon:477974
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein P268
Insert Site Comments RIR1-b
Intein Size (aa) 375
Intein N-terminal PEKKINATNP/C
Intein C-terminal HN/CGEQPLSPGE
Accession No. ACA58780.1 in NCBI/protein, Daud_1269
Intein aa Sequence >ACA58780.1 | CP000860 |GI:169637063 | Daud RIR1 ntein (including -1 and +1 extein residues)
PCVTGDTWVTTGAGPRQVRELVGRPFEAIVNGKAYGTGKDGFFQTGTKPVVKLCTREGYTVRLTADHMILRVTDKTRYRL
SQEWVPAADLKAGDQIVLHNHRPLPGWPGALTEGEGYLLGLLVGDGTLKKETAILSTWVKKQAVNGSGAGDGVDSVMQLV
LQYTGKMRHRADFTGWDPVKGRNEYRFKSAGIKVLAERMGLGPGRKTATPEIEGASSEGYRGFLRGLFDADGTIIGEQQK
GVSIRLTQSNRDLLGIVQRMLARLGIISTIYEGRRPAGLKSLPDGNGGNKEYHIKAQHELVISRDNISVFAERIGFGNSE
KAGRLKSLLEAYKRDLNRERFTATVLCVEEDGIEDVYDVQVPGINAFDANGIVAHNC
Block A CVTGDTWVTTGAG 13
Block B GYTVRLTADHMILR 70
Block C LLGLLVGDG 126
Block D
Block E FLRGLFDADG 231
Block H QSNRDLLGIVQRMLARLGI 265
Block F DVYDVQV**PGINAFD 367
Block G NGIVAHNC 376
Initially Contributed by Fran Perler
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address
Independently Found By
Comments
Date Submitted 10/29/2008
References Chivian 2008

Last database update: 11/05/10

InBase Home Background Info Splicing mechanism Splicing motifs DOD Endo motifs
Intein registry Intein alleles Selected properties Blast against InBase  
Do you have an intein? Submitting data Bibliography Intein links NEB Home