| Intein Name |
Hwa PolB-1 |
| Prototype Allele |
Hwa PolB-1 |
| Extein Name |
DNA polymerase B (alpha or type-B family) |
| Intein Class |
Theoretical |
| Organism Name |
Haloquadratum walsbyi DSM 16790 |
| Organism Description |
Halophile, taxon:362976, strain: DSM 16790 = HBSQ001 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N318 |
| Insert Site Comments |
pol-d |
| Intein Size (aa) |
434 |
| Intein N-terminal |
TDPDILTGWN/C |
| Intein C-terminal |
HN/CDDFDVPYFL |
| Accession No. |
CAJ51833 in NCBI/protein, locus_tag="HQ1705A |
| Intein aa Sequence |
>gi|109625409|emb|CAJ51833.1|[109625409] CAJ51833 | Hwa PolB-1 intein (including -1 and +1 extein residues)
NCLPSDARIQMADGTETEIHAVEIGDNVIGTTDQRSVTATVTNKWKSEREIYEFSLADGTSLRSSGDHRIMISDSNTVDW
KSGSDIEQGEYVLKPRQLPVDDPTIPIINNLLSSESANIIDTLEVDALDSTGRSMNIHSSNPRESIAHTATLSMADGGDQ
KQRNETTNNTLDLNRTVTKQDLYAIGRVLHNRITPRQDGITPVSQATLIDNSVLSSPSPANTQHQSDSILTEVISSLRGL
VSPGAHAIDFSAIYEMPKSHIAQFLAGTLDGSETGETTSSNLTVTTESASIARWYAQLYRRLGIYAQYQADAVHIANNAC
DLQRLSDAILPRLRCSDTIDYVKTQIDTVCDSSLKHSRASSTGLSGDEANIRQFSDDGPQNKSYAAQPDSSDYDDDWNAY
VFVEIEAITLNGTETTYDIETTTHNFVADDCLVHNC |
| Block A |
CLPSDARIQMADG 13 |
| Block B |
GTSLRSSGDHRIMI 71 |
| Block C |
|
| Block D |
|
| Block E |
FLAGTLDGSE 272 |
| Block H |
TESASIARWYAQLYRRLGI 303 |
| Block F |
TTYDIET***TTHNFV 425 |
| Block G |
DDCLVHNC 435 |
| Initially Contributed by |
Søren Overballe-Petersen |
| Contributor's Address |
University of Copenhagen
Department of Mol Biol - MacNeill Lab.
Ole Maaløes Vej 5
2200 Copenhagen
Denmark |
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
soerenov@m7.stud.ku.dk |
| Independently Found By |
|
| Comments |
|
| Date Submitted |
06/26/2007 |
| References |
Bolhuis 2006 |
