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Sel-PC7942 DnaE-c Intein
Intein Name Sel-PC7942 DnaE-c
Prototype Allele Ssp DnaE-c
Extein Name DnaE pol subunit, DNA polymerase III alpha subunit
Intein Class Theoretical
Organism Name Synechococcus elongatus PC7942
Organism Description taxon:1140
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif None
Location in Extein None
Insert Site Comments dnaE-a, Beta and tau binding domains
Intein Size (aa) 36
Intein N-terminal FDQMVLFAEY/C
Intein C-terminal SN/CFNKSHSTAY
Accession No. ABB56602 in NCBI/protein, Synpcc7942_0570
Intein aa Sequence >gi|81168262|gb|ABB56602.1|[81168262] Sel-PC7942 DnaE-c C-terminal intein fragment (including +1 extein residue)
MVKIVRRRSLGVQPVYDLGVATVHNFVLANGLVASNC
Block A
Block B
Block C None
Block D None
Block E None
Block H None
Block F PVYDLGV**ATVHNFV C27
Block G NGLVASNC C37
Initially Contributed by Fran Perler
Contributor's Address
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Independently Found By
Comments This DnaE intein is a natuarlly split intein. Homolog of the catalytic alpha subunit of E. coli DNA polymerase III. BLOCKS A & B ARE IN Fragment N AND BLOCKS F & G ARE IN Fragment C.
Date Submitted 04/19/2006
References

Last database update: 11/05/10

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