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Sel-PCC6301 DnaE-n Intein
Intein Name Sel-PCC6301 DnaE-n
Prototype Allele Ssp DnaE-n
Extein Name DnaE pol subunit, DNA polymerase III alpha subunit
Intein Class Theoretical
Organism Name Synechococcus elongatus PCC 6301
Organism Description Cyanobacterium, taxon:269084"Berkely strain 6301~equivalent name: Synechococcus
sp. PCC 6301~synonym: Anacystis nudulans"
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif None
Location in Extein Y757
Insert Site Comments dnaE-a, Beta and tau binding domains
Intein Size (aa) 113
Intein N-terminal FDQMVLFAEY/C
Intein C-terminal SN/CFNKSHSTAY
Accession No. YP_172608 in NCBI/protein, syc1898_d
Intein aa Sequence >gi|56751907|ref|YP_172608.1|[56751907] Sel-PCC6301 DnaE-n N-terminal intein fragment (including -1 extein residue)
YCLAADTEVLTVEYGPIAIGKLVEENIRCQVYCCNPDGYIYSQPIGQWHQRGEQEVIEYELSDGRIIRATADHRFMTEEG
EMLSLDEIFERSLELKQIPTPLLAIAQPSPLATA
Block A CLAADTEVLTVEY N13
Block B GRIIRATADHRFMT N76
Block C None
Block D None
Block E None
Block H None
Block F
Block G
Initially Contributed by Fran Perler
Contributor's Address
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Independently Found By
Comments This DnaE intein is a natuarlly split intein. Homolog of the catalytic alpha subunit of E. coli DNA polymerase III. BLOCKS A & B ARE IN Fragment N AND BLOCKS F & G ARE IN Fragment C.
Date Submitted 02/22/2005
References

Last database update: 11/05/10

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