| Intein Name |
Cmo RPB2 (RpoBb) |
| Prototype Allele |
Cst RPB2 |
| Extein Name |
DNA-directed RNA polymerase beta subunit, fragment 2 |
| Intein Class |
Theoretical |
| Organism Name |
Chlamydomonas moewusii, strain UTEX 97 |
| Organism Description |
Green alga, chloroplast gene, taxon:3054 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
H867 |
| Insert Site Comments |
RPB2-b |
| Intein Size (aa) |
695 |
| Intein N-terminal |
LVHMVDDKMH/C |
| Intein C-terminal |
GN/SRSTGPYSLV |
| Accession No. |
ABU88332 in NCBI/protein ,rpoBb |
| Intein aa Sequence |
>gi|156619305|gb|ABU88332.1|[156619305] Cmo RPB2 intein (including -1 and +1 extein residues)
HCLTPDHDVLTTKGWRPINKISYDDKVATLQNDGTLSYQKPTNIFEYKNYKGPLYHIKNKNINLLVTPNHRM
YIRKIERNNVSSMFDHCTLLTKTLETSLRSTTKPIFKLKTKKKNAILFSQIKNIKKTSSFLDKSERSFFGTL
SRQHSISTYNYANKTKKISTNIVQSLCTSTGLMNFTKTKNLLFVNKKSCKILKKETSQSKNNFANYELIEVQ
KLRGQTVAYLKNAIWPASDYLFNLKTNKENVYKPVETFWSNSAKSHFPASTSASSFNIDNSWLTFFALWLTG
TWTITYNMYSPPNVSTDTTNCAFDLKEGGYAPATTNSGVSFTHVMPTHCGGLLGQGLKQVEDRNGTFSLNEK
VLESKAVASLVQSASTEEQHENQSLINFQIKTNQYNQSLLELLEKVTKNLGYDYEKFENFLIIRNNELGNYL
MALTNFNFDRDYTDVGGYHNTTQNETLKHYANQGYVNAQSALTSLYINRASGTTDLTHHYKSTNSDDIGNNG
QVLCHNKKSLPSWVWLLSQKQARLFLTTLCLASQKTTKNISNSDINPNNIHFYTNSLNLSDDIMRLALHAGW
SANKHLQNKTYWHLTILKKQNNPIYYSEIEQGPVDARCTWRRRIKNKKLTRDAQRVSSGMFKNHLIFAEKIW
RKNTELNITPEQEQTQKIINYKGPVFCLTVPNEVFYVRRNGIPVWTGNS |
| Block A |
CLTPDHDVLTTKG 13 |
| Block B |
NINLLVTPNHRMYI 73 |
| Block C |
FFALWLTGT 288 |
| Block D |
KKSLPSWV 517 |
| Block E |
|
| Block H |
TNSLNLSDDIMRLALHAGW 575 |
| Block F |
PVFCLTV***PNEVFY 683 |
| Block G |
IPVWTGNS 696 |
| Initially Contributed by |
Claude Lemieux |
| Contributor's Address |
Departement de biochimie et de microbiologie
Universite Laval
Quebec (QC) Canada G1K 7P4 |
| Contributor's Phone No. |
(418) 656-2131 ext. 5171 |
| Contributor's FAX No. |
(418) 656-7176 |
| Contributor's Email address |
claude.lemieux@rsvs.ulaval.ca |
| Independently Found By |
|
| Comments |
|
| Date Submitted |
05/12/2007 |
| References |
Turmel 2008 |
