| Intein Name |
HaV01 Pol |
| Prototype Allele |
Tli Pol-2 |
| Extein Name |
DNA polymerase B (alpha or family B) |
| Intein Class |
Theoretical |
| Organism Name |
Heterosigma akashiwo virus 01 |
| Organism Description |
Algal virus, taxon:97195, strain HaV01 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
|
| Location in Extein |
D646 |
| Insert Site Comments |
pol-c, Pol Motif C |
| Intein Size (aa) |
232 |
| Intein N-terminal |
YPDAKVIYGD/S |
| Intein C-terminal |
KN/TDSVYVNFPS |
| Accession No. |
BAE06251 in NCBI/protein; AB194136 in DDBJ |
| Intein aa Sequence |
>gi|70568331|dbj|BAE06251.1|[70568331]AB194136 in DDBJ | HaV01 Pol intein (including -1 and +1 extein residues)
DSVTKETPLMLRTMETCGNHKHEVISIENVFTDNMRSIDMYSIIGEKEHVMLSRNEEIWTGENWSRIIRVIRHKTQKKIY
GVLTENGYVEVTEDHSLISSDYELLKPKNCIVKETQLLQSFPDIVENSTIENNMIDIPKGQPCRLTVFGQVSAMIIYTYL
KRKNYSITLNVCNVNSNKFYISFMERPRFKNTKKNIIKKIFFIRNTDNEEYVYDVETEDGIFHAGIGEIIVKNT |
| Block A |
SVTKETPLMLRTM 13 |
| Block B |
NGYVEVTEDHSLIS 98 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
YVYDVET**EDGIFHA 223 |
| Block G |
GEIIVKNT 233 |
| Initially Contributed by |
Shmuel Pietrokovski |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
shmuel.pietrokovski@weizmann.ac.il |
| Independently Found By |
Yoko Shirai and Keizo Nagasaki
National Research Institute of Fisheries and Environment of Inland Sea |
| Comments |
|
| Date Submitted |
04/06/2005 |
| References |
Nagasaki 2005
Nagasaki 2005B |
