| Intein Name |
Ter DnaE-1 |
| Prototype Allele |
Ter DnaE-1 |
| Extein Name |
DnaE pol subunit, DNA polymerase III alpha subunit |
| Intein Class |
Experimental |
| Organism Name |
Trichodesmium erythraeum IMS101 |
| Organism Description |
Cyanobacterium, taxon:203124 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
None |
| Location in Extein |
L719 |
| Insert Site Comments |
dnaE-d |
| Intein Size (aa) |
1365 |
| Intein N-terminal |
PILKETYGVL/C |
| Intein C-terminal |
HN/CYQEQIMKMA |
| Accession No. |
ABG51145 in NCBI/protein, Tery_1889,Tery02003047 |
| Intein aa Sequence |
>GI:110166605 | ABG51145 || Ter DnaE-1 intein (including -1 and +1 extein residues)
LCLPKGTLIDQPDGSREAIENIKSGEVILTSDGRKVWEAKVAKQWRSGVREILKITLSSGTVIYSGKNHRFLTPEGDKFA
WELQPQVGRVKNALIYGSAVYEKWQVSSNQKQLRKNDAYLLGLLVGKSNLISSTPNVSFSTQGAITWGKNLIDETWGGEA
KHYFDTSRRQVYLNFNTQSKPTALTEFLDGIYGAQNWQVESVAKHLPEDILDYSEKDRIDLLRGLWDSGGFDGKKLLYYP
GSSPQLLSQVCQLLGSLKIDYYLADNSVRISDRSRFIDILENYQMSSQQKEEISESYLPASSWFLKGGSENNIQKTDSSS
RKTGEASQQKATLFTQNLFSAQTPAENWEKVGENHLLSSWFLTDASENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQT
PAENWEKVRENHLLSSWFLTNASEIYLQRIDSSSRKTGEASQQKATLFTQNLFSVQTPAENWEKVRENHLLSSWFLTDAS
ENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTNASENNIQKTDSSSRKTGEASQQKAT
LFTQNLFSAQTPAENWKKSRKNHLPSSWFLKGGSENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVRENH
LLSSWFLKDASENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTDASENNIQKTDSSSR
KTGEASQQKATLFTQNLFSAQTPAENWEKVRENHLLSSWFLTDASENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTP
AENWEKVRENHLLSSWFLTNASENNIQKTDSSSRKTGEASQQKATLFTQNLFSAQTPAENWKKARENHLLSSWFLTNASE
IYLQRTDSSSRKTGEASQQKATLFTQNLFSVQTPAENWKKARENHLLSSWFLTNASEIYLQRTDSSSRKTGGASQQKATL
FNQNLFSVQTPAENWEKVRENYLLSSWFLTNASEIYLQRTDSSSRKTGEASQQKATLFTQNLFSVQTPAENWKKARENHL
LSSWFLTNASEIYLQRTDSSSRKTGGASQQKATLFNQNLFSVQTPAENWKKARENHLLSSWFLTNASEIYLQRTDSSSRK
TVEASQQKATLFTQNLFSAQTPAENWEKVRENYLLSSWFLTNASEIYLQRIDSSSRKTGEACQQKATLFNQNLFSAQTPA
ENWKKVRENHLLSSWFLTDASENNIQKTDSSSRKTVEASQQKATLFTQNLFSAQTPAENWKKSRKNHLPSSWFLTDASEN
NIQKTDSSSRKTGEASQQKATLFTQNLFSVQTPELENWECEKTYLQDVRVVHVVSVEEVGEAECFDLEMEDQSSPYFLAE
GVVVHNC |
| Block A |
CLPKGTLIDQPDG 13 |
| Block B |
GTVIYSGKNHRFLT 72 |
| Block C |
None |
| Block D |
None |
| Block E |
None |
| Block H |
None |
| Block F |
ECFDLEMEDQSSPYFL 1358 |
| Block G |
EGVVVHNC 1366 |
| Initially Contributed by |
Paul Liu |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
pxqliu@dal.ca |
| Independently Found By |
|
| Comments |
Intein has 17 repeats of a 57aa sequence. This Ter DnaE fragment has 2 inteins plus the N-terminal fragment of a split intein. Homolog of the catalytic alpha subunit of E. coli DNA polymerase III.
This sequence replaces the previous genome shotgun sequence submitted by Paul Liu to InBase from ZP_00075043.1 in NCBI/protein, Tery4385. This new sequence is larger than the previous sequence. |
| Date Submitted |
03/24/2004 |
| References |
Liu 2003
Caspi 2003 |
