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Hwa Pol-II-2 Intein
Intein Name Hwa Pol-II-2
Prototype Allele
Extein Name DNA polymerase II, DP2 subunit
Intein Class Theoretical
Organism Name Haloquadratum walsbyi DSM 16790
Organism Description Halophile, taxon:362976, strain: DSM 16790 = HBSQ001
Domain of Life Archaea
Endonuclease Activity
Endo Motif DOD
Location in Extein G1524
Insert Site Comments pol_II-b
Intein Size (aa) 544
Intein N-terminal REYLPDKRGG/S
Intein C-terminal HN/SMDAPLVMSS
Accession No. CAJ53557 in NCBI/protein, locus_tag="HQ3461A"
Intein aa Sequence >gi|109627078|emb|CAJ53557.1|[109627078] Hwa Pol-II-2 intein (including -1 and +1 extein residues)
GSVAADSRLVAVSPDDKIVFTTIEDFWKKLNTPIERNGKFRKRTCVSEGWQTYAFDENHEASLRPIEKAIRYTADESEQL
RRITTQLGRSLDITDEHSLFRYDDGIEEVAGDDLTAGDIIVAPRTLDVEVTQTTLDLSEYIHDNERCPSEQTGSGELNLA
SKSAISDSRNKETPGVTHNILPQRSKFTDEMTTLSPTAVGGLESEQNETLRVGESTGAIERYINVDDSFGWLLGQFIAQR
SISTDALTMTVHTAAEKHAERIVATSDSVFGIKPTVNSIERGYEIVFPSVFDTIVSGLTAKEQSEPEQDVDHTHTDEIGI
PECILHAPDDIVLSFLQGFILAENAQRKGNAASEASEMVSESETTVTLETPSVGVKDGLVFLCHRLGVITDISEKSGEEY
SVHFEESRYTVSIATEGKTNPLDQILNGERPTMPEGVSVPVPDALLTIHESIANSPHIDQVIPDTVVQQETVSLETLQSL
LTGLSTVDLPAQLEAKRDELTLLTEGDLSYLRVESVECVDYDGYLYDLQVGGEPVFTANWLYAHNS
Block A SVAADSRLVAVSP 13
Block B GRSLDITDEHSLFR 100
Block C LLGQFIAQR 239
Block D
Block E FLQGFILAEN 343
Block H ESETTVTLETPSVGVKDGL 378
Block F VDYDGYL**YDLQVGG 531
Block G NWLYAHNS 545
Initially Contributed by Fran Perler
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address
Independently Found By
Comments Clone requests: <fpf@rzg.mpg.de>
Date Submitted 10/20/2006
References Bolhuis 2006

Last database update: 11/05/10

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