| Intein Name |
Nph rPol A'' |
| Prototype Allele |
Mja rPol A'' |
| Extein Name |
DNA-directed RNA polymerase subunit A'' |
| Intein Class |
Theoretical |
| Organism Name |
Natronomonas pharaonis DSM 2160 |
| Organism Description |
taxon:348780 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
M77 |
| Insert Site Comments |
rPol A''-a |
| Intein Size (aa) |
492 |
| Intein N-terminal |
QSIGEPGTQM/S |
| Intein C-terminal |
HN/TMNTFHYAGV |
| Accession No. |
CAI48149 in NCBI/protein, NP0116A, gene="rpoA2" |
| Intein aa Sequence |
>gi|76556578|emb|CAI48149.1|[76556578] Nph rPol A'' intein (including -1 and +1 extein residues)
MSIPADEQVVVRRNGETELTEIGPLVDSLMDSRETRSFDDHEVTLAPDGIEVPSLSSEETVEWKPIEEVSRHETPDELLR
FELESGRSIRATKAHSFVTRQENEVVPVAGEELEAGDWLPVVASLDATDTQETVDLRKYLPAGDYWYTSVLADGGAEAVP
GGPDQLRNKRAALEAGELAEHTAYPVQGTVGLPEQFPLDEETGFFVGAWLAEGSLADHYVSISNVDAAFQSRIRSFAERF
DLTVNEYENDSGFAAGYDIRLNGTILSDFLRAACTDDGEKSIPGFAIGANEAFLKGLLQGYFSGDGNVGTNAIRSSSTSD
RLTAGVGLLLARFDVYATLGQQEDSRTLRVPKKHVSRFDNRIGMVGERGAELEALAESADSDGPDATDQIPNFGDALEAV
AEAADIPQRQVNSATKRQRIDRSRLARLVAAAEAELDGEQSELDALRQAVTGDVVWDRIESIETVESDHEYVYDVSVEGL
ETFTTADGVVTHNT |
| Block A |
SIPADEQVVVRRN 13 |
| Block B |
GRSIRATKAHSFVT 98 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
YVYDVSV**EGLETFT 483 |
| Block G |
DGVVTHNT 493 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
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| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
|
| Comments |
|
| Date Submitted |
10/27/2005 |
| References |
Falb 2005 |
