| Intein Name |
Tko IF2 |
| Prototype Allele |
Mja IF2 |
| Extein Name |
Translation initiation factor |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus kodakaraensis KOD1 |
| Organism Description |
Thermophile, taxon:69014 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K20 |
| Insert Site Comments |
IF2-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
546 |
| Intein N-terminal |
AVLGHVDHGK/C |
| Intein C-terminal |
HN/TTLLDRIRHT |
| Accession No. |
YP_183718 in NCBI/protein, TK1305 |
| Intein aa Sequence |
>gi|57641240|ref|YP_183718.1|[57641240] Tko IF2 intein (including -1 and +1 extein residues)
KCLLPDEKVILPEHGPITLKGLFDLAKETVVADNEKEIRKLGAKLTIVGEDGRLRVLESPYVWKVRHRGKMLRVKLKNWH
SVSVTPEHPFLTTRGWVRADQLKPGDYVAVPRVIHGNESDERFVSFVYEKLKNDELIAKLRGEVLSKISSEFKGDRAYKV
ERNVFRWEDIERLNLWDEVERVAFTPRMHRSGKPLHYVKLPRSPEEWEAFFYFAGVMFGDGSQDKIANNDVEVYEELKKL
SVLGVAVKRVERTTSYEIELTNGKNALLRLLRVLFEYPERQKAKSIRVPRILFIAPRKYVSRFLRGYFDADGHVSLKDAR
IEVTSASQEFLEDLSLLLLRFGIVSKIYRSDYTTLVISGRRNLDLFRRYIGFSVKNKAEALEKAIKKSRRSESYPIFEEL
KRLRLLFGFTRTELNSNVPFYGKYESEEAPSYETLMRILDAIEKGSINLDKKIAVLEGRIRDHNYIKAFEKDGLIKDGKL
TELGRELLEVWRNREFDSSDVDYIRNLAENLVFIPVEDIEEFEYEGYVYDVTTETHNFVANGILVHNT |
| Block A |
CLLPDEKVILPEH 13 |
| Block B |
WHSVSVTPEHPFLT 91 |
| Block C |
FAGVMFGDG 220 |
| Block D |
|
| Block E |
FLRGYFDADG 302 |
| Block H |
SASQEFLEDLSLLLLRFGI 342 |
| Block F |
YVYDVTT***ETHNFV 538 |
| Block G |
NGILVHNT 547 |
| Initially Contributed by |
Fran Perler |
| Contributor's Address |
|
| Contributor's Phone No. |
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| Contributor's FAX No. |
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| Contributor's Email address |
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| Independently Found By |
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| Comments |
Formly called Pyrococcus kodakaraensis. |
| Date Submitted |
02/28/2005 |
| References |
Fukui 2005 |
