| Intein Name |
Pab Pol-II |
| Prototype Allele |
Pho Pol-II |
| Extein Name |
DNA polymerase II, DP2 subunit |
| Intein Class |
Experimental |
| Organism Name |
Pyrococcus abyssi |
| Organism Description |
Thermophile, strain Orsay, taxon:29292 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
None |
| Location in Extein |
N954 |
| Insert Site Comments |
pol_II-a |
| Intein Size (aa) |
185 |
| Intein N-terminal |
PYFHAAKRRN/C |
| Intein C-terminal |
HQ/CDGDEDAVML |
| Accession No. |
E75199 in NCBI/protein, PAB2404 |
| Intein aa Sequence |
>gi|7514786|pir||E75199| Pab Pol-II intein (including -1 and +1 extein residues)
NCFPGDTRILVQIDGVPQKITLRELYELFEDERYENMVYVRKKPKREIKVYSIDLETGKVVLTDIEDVIK
APATDHLIRFELEDGRSFETTVDHPVLVYENGRFIEKRAFEVKEGDKVLVSELELVEQSSSSQDNPKNEN
LGSPEHDQLLEIKNIKYVRANDDFVFSLNAKKYHNVIINENIVTHQC |
| Block A |
CFPGDTRILVQID 13 |
| Block B |
GRSFETTVDHPVLV 97 |
| Block C |
None |
| Block D |
None |
| Block E |
None |
| Block H |
None |
| Block F |
FVFSLNA**KKYHNVI 176 |
| Block G |
ENIVTHQC 186 |
| Initially Contributed by |
Joël Quérellou |
| Contributor's Address |
Ifremer, BP 70
29280 Plouzane
France |
| Contributor's Phone No. |
33 2 98 22 40 01 |
| Contributor's FAX No. |
33 2 99 22 46 00 |
| Contributor's Email address |
Jquerell@ifremer.fr |
| Independently Found By |
|
| Comments |
N at intein C terminal is replaced by Q (Quérellou).
This gene is part of a 2 subunit archaeal DNA pol that may be the replicative pol and is specific to Archaea. |
| Date Submitted |
06/26/1999 |
| References |
Lecompte 2001
Cohen 2003
Mills 2004
Mills 2005
Dorval 2006 |
