| Intein Name |
CV-NY2A ORF212392 |
| Prototype Allele |
|
| Extein Name |
ORF212392 |
| Intein Class |
Theoretical |
| Organism Name |
Chlorella virus NY2A infects Chlorella NC64A, which infects Paramecium bursaria |
| Organism Description |
dsDNA eucaryotic virus,taxon:46021, Family Phycodnaviridae |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
K438 |
| Insert Site Comments |
ORF212392-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
391 |
| Intein N-terminal |
LAFHSVGSGK/C |
| Intein C-terminal |
HN/TVSALGIALA |
| Accession No. |
DQ491002 in NCBI/Nucleotide |
| Intein aa Sequence |
>gi|94323213|gb|DQ491002.1|[94323213] CV-NY2A ORF212392 intein (including -1 and +1 extein residues)
KCLHPETDVITFSGTVIKAKDLRPGMQLMGLDSTPRRVLDIGRGREMMYEIVPIKGEPWKCNETHVLSLIYNEHGSIQKT
KSNTYFVKFHEYTSDGRGVFKYPTVKTLKEAQDIVARLNPNHIVDIPLNEYLNLPKHVKNSLKLFRSGPITFPNKPEPKF
HPYILGAWLGDGKSSTAEITIDVKEKPLLNHVSNLLRPLGMIASKRTGASSLKRTDHYRIQYPDNNSRKGKSNPFMDALK
SYDLISNKHIPDDIKCGSLNVRLQILAGLLDTDGYLGGNCFEITQKNKRLSEDIAFVARSLGYAAYLKMVKKSCTYKGEK
KCGTYYKVSISGEGLEKIPTILERKCAKPRQQVKDARRTGFTVRKLSVGDYVGPVLDKDHRYLLGDFTVTHNT |
| Block A |
CLHPETDVITFSG 13 |
| Block B |
GEPWKCNETHVLSL 68 |
| Block C |
ILGAWLGDG 171 |
| Block D |
NKHIPDDI 253 |
| Block E |
ILAGLLDTDG 273 |
| Block H |
QKNKRLSEDIAFVARSLGY 302 |
| Block F |
VGDYVGPVLDKDHRYL 382 |
| Block G |
DFTVTHNT 392 |
| Initially Contributed by |
Margi Butler |
| Contributor's Address |
University of Otago
Dunedin
New Zealand |
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
margi.butler@stonebow.otago.ac.nz |
| Independently Found By |
|
| Comments |
The intein is in an unidentified hypothetical protein encoded within a virus that infects a eukaryote, Chlorella. Chlorella is a green plant that is a symbiont of Paramecium bursaria. Other Chlorella virus isolates have ‘empty’ alleles at this site. |
| Date Submitted |
05/17/2006 |
| References |
Fitzgerald 2007 |
