| Intein Name |
Tsp AM4 RtcB |
| Prototype Allele |
Mja RtcB |
| Extein Name |
Protein of unknown function UPF0027 |
| Intein Class |
Theoretical |
| Organism Name |
Thermococcus sp. AM4 |
| Organism Description |
Taxon: 246969 |
| Domain of Life |
Archaea |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
N96 |
| Insert Site Comments |
rtcB-a |
| Intein Size (aa) |
481 |
| Intein N-terminal |
SPGGVGYDIN/C |
| Intein C-terminal |
HN/CGVRLIRTNL |
| Accession No. |
ZP_04879086.1 in NCBI protein, /locus_tag="TAM4_1534" |
| Intein aa Sequence |
>ZP_04879086.1 GI:254172411 | Tsp AM4 RtcB intein (including -1 and +1 extein residues)
NCLAPGSKVLTEHGYWIKVEEMPEKFKLQGLRVYDVDEGHNDFSQVAFVAERDVEENELAVRIITESGKVIEGSEDHPVL
TPQGYVYLGNVKEGDEVLIYPFEGVEFEERKGVLLSEDDFKGEDGQIVKFLRERKLLPLRWDDPRIGTLARILGFAFGDG
HLGEMDGRLYLSFYGKEETLKELKKDLERLGISANLYVRERDYHIETVSGEYEGRSVSAELRVTSRSFALLMEKLGMPRG
RKAETLYNVPEWIKSAPLWVKRNFLAGLFAADGSIVEFKGNTPLPINLTQSKAEALEENLRGFMEEIAGLLAEFGIRTTV
YRVKSKKGVTYRLALVGEESIRNFLGRINYEYDIEKKAKGLIAYAYLRFKERVRAERKRAAEIARRVYAETGSVAKAHEA
VRDVVNKRFVERAIYEGEKEPRVPKDFPTFEEFARERGYEGGFVAEKVVKVERVRPSYEKFYDIGVYHRAHNFIANGVVV
HNC |
| Block A |
CLAPGSKVLTEHG 13 |
| Block B |
GKVIEGSEDHPVLT 80 |
| Block C |
ILGFAFGDG 159 |
| Block D |
LYNVPEWI 252 |
| Block E |
FLAGLFAADG 272 |
| Block H |
ENLRGFMEEIAGLLAEFGI 315 |
| Block F |
KFYDIGV*YHRAHNFI 473 |
| Block G |
NGVVVHNC 482 |
| Initially Contributed by |
GOKULNATH SUNTHARAJ & RAGHUNATH AZHWAR |
| Contributor's Address |
Department of Bioinformatics,
School of Life Sciences,
Bharathidasan University,
Tiruchirappalli - 620 024
Tamilnadu
INDIA |
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
raghu_lifescience@hotmail.com |
| Independently Found By |
|
| Comments |
|
| Date Submitted |
11/20/2009 |
| References |
|
