| Intein Name |
Rma DnaB |
| Prototype Allele |
Ssp DnaB |
| Extein Name |
DnaB helicase |
| Intein Class |
Experimental |
| Organism Name |
Rhodothermus marinus |
| Organism Description |
Thermophile, taxon: 29549 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
G420 |
| Insert Site Comments |
dnaB-a |
| Intein Size (aa) |
428 |
| Intein N-terminal |
PQLSDLRESG/C |
| Intein C-terminal |
HN/SIEQDADVVL |
| Accession No. |
AAB66912.1 in NCBI/protein |
| Intein aa Sequence |
>gi|2335167|gb|AAB66912.1|AF006675.1| Rma DnaB intein (including -1 and +1 extein residues)
GCLAGDTLITLADGRRVPIRELVSQQNFSVWALNPQTYRLERARVSRAFCTGIKPVYRLTTRLGRSIRAT
ANHRFLTPQGWKRVDELQPGDYLALPRRIPTASTPTLTEAELALLGHLIGDGCTLPHHVIQYTSRDADLA
TLVAHLATKVFGSKVTPQIRKELRWYQVYLRAARPLAPGKRNPISDWLRDLGIFGLRSYEKKVPALLFCQ
TSEAIATFLRHLWATDGCIQMRRGKKPYPAVYYATSSYQLARDVQSLLLRLGINARLKTVAQGEKGRVQY
HVKVSGREDLLRFVEKIGAVGARQRAALASVYDYLSVRTGNPNRDIIPVALWYELVREAMYQRGISHRQL
HANLGMAYGGMTLFRQNLSRARALRLAEAAACPELRQLAQSDVYWDPIVSIEPDGVEEVFDLTVPGPHNF
VANDIIAHNS |
| Block A |
CLAGDTLITLADG 13 |
| Block B |
GRSIRATANHRFLT 76 |
| Block C |
LLGHLIGDG 121 |
| Block D |
EKKVPALL 206 |
| Block E |
FLRHLWATDG 226 |
| Block H |
TSSYQLARDVQSLLLRLGI 263 |
| Block F |
EVFDLTV**PGPHNFV 420 |
| Block G |
NDIIAHNS 429 |
| Initially Contributed by |
Paul Xiang-Qin Liu |
| Contributor's Address |
Biochemistry Department
Dalhousie University
Halifax, Nova Scotia B3H 4H7
Canada |
| Contributor's Phone No. |
902-494-1208 |
| Contributor's FAX No. |
902-494-1355 |
| Contributor's Email address |
pxqliu@dal.ca |
| Independently Found By |
|
| Comments |
This intein is related to the Ssp DnaB intein through a relavtively recent intein transfer (homing) (Liu). |
| Date Submitted |
|
| References |
Liu 1997B
Zhao 2004
Bjornsdottir 2006 |
