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ShP-Sfv-2a-2457T-n Primase Intein
Intein Name ShP-Sfv-2a-2457T-n Primase
Prototype Allele ShP-Sfv-5 Primase
Extein Name DNA primase, Helicase
Intein Class Theoretical
Organism Name Shigella flexneri 2a str. 2457T
Organism Description Putative bacteriphage
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein K371
Insert Site Comments primase-a, ATP/GTP-binding site motif A (P-loop)
Intein Size (aa)
Intein N-terminal LVNGVNGHGK/A
Intein C-terminal ?
Accession No. AAP16196 in NCBI/protein, S0718
Intein aa Sequence >GI:30043918 |AAP16196| ShP-Sfv-2a-2457T-n Primase intein (including -1 and +1 extein residues)
KACPLNEPILLADGTWTTHGNVKIGDQVASVDGNPSTVTGIFPQGVRDVYRVTFEDGRYVDCAGDHLWEVTSRGFTKGEK
RRVIDTFGLKRLSETKRHKNGVRIPEITGDFGDHSEPLAWVIGSLLGDGSLSNGSVKFSNVEPYMIERMKAELPDYNFSG
DGKDWLISTARGQVNPLMETLRGYGLMGCTAKNKFIPRVFFSANKSTRIGMLCGLLETDGYVEKDGTLVFSSASEELRNE
VVNKNWPPS
Block A ACPLNEPILLADG 13
Block B GRYVDCAGDHLWEV 69
Block C VIGSLLGDG 128
Block D NKFIPRVF 199
Block E MLCGLLETDG 219
Block H
Block F
Block G
Initially Contributed by Fran Perler
Contributor's Address
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Independently Found By
Comments Only partial gene, but 100% identical to Sfv-5 Primase intein until the end of the sequence.
Date Submitted 10/23/2006
References Nie 2006
Wei 2003

Last database update: 11/05/10

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