| Intein Name |
Dra Snf2-c |
| Prototype Allele |
Dra Snf2 |
| Extein Name |
SNF2/Rad54 helicase |
| Intein Class |
Theoretical |
| Organism Name |
Deinococcus radiodurans R1, TIGR strain |
| Organism Description |
Radiation and DNA damage resistent, taxon:1299 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
None |
| Insert Site Comments |
snf2-a, ATP/GTP-binding site motif A (P-loop) |
| Intein Size (aa) |
343 |
| Intein N-terminal |
ILADDMGLGK/A |
| Intein C-terminal |
HN/TLQTLAHLLK |
| Accession No. |
7471820 in NCBI/protein, DR1259 |
| Intein aa Sequence |
>H75417 GI:7471820 DR1259| TIGR strain | Dra Snf2-c C-terminal intein fragment (including +1 extein residue)
MGWGCMARAGATNSFPRITCWEAPRSRLAVLQGLLDTDGHAGVVVEYVSVSEHLARGVVE
LVQSLGGVARIRQKATSHTYGGEKKTGLAWRATLKLPPELEPFRLAAKRAAYRRPTKYPP
TRGIKSIEWVGHKPAQCIAVDAPDHLYVTEGYIVTHNT |
| Block A |
|
| Block B |
|
| Block C |
|
| Block D |
|
| Block E |
VLQGLLDTDG C39 |
| Block H |
SVSEHLARGVVELVQSLGG C67 |
| Block F |
PAQCIAV*DAPDHLYV C148 |
| Block G |
GYIVTHNT C158 |
| Initially Contributed by |
Shmuel Pietrokovski |
| Contributor's Address |
Molecular Genetics Dept.
Weizmann Institute of Science
PO Box 26
Rehovot 76100
Israel |
| Contributor's Phone No. |
972 (8) 934 2747 |
| Contributor's FAX No. |
972 (8) 934 4108 |
| Contributor's Email address |
Shmuel.Pietrokovski@weizmann.ac.il |
| Independently Found By |
|
| Comments |
Intein begins with Ala1. Rad54 related protein. Apparent 1 base insertion results in reading frame shift between Q212 and R213, which is absent in the ATCC13939 type strain intein. |
| Date Submitted |
12/04/1999 |
| References |
White 1999
Makarova 2001
Southworth 2002 |
