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Fte RPB2 (RpoB) Intein
Intein Name Fte RPB2 (RpoB)
Prototype Allele Cst RPB2
Extein Name DNA-directed RNA polymerase beta subunit, fragment 2
Intein Class Theoretical
Organism Name Floydiella terrestris, strain UTEX 1709
Organism Description Green alga, chloroplast gene, taxon:51328
Domain of Life Eucarya
Endonuclease Activity
Endo Motif DOD
Location in Extein H95
Insert Site Comments RPB2-b
Intein Size (aa) 377
Intein N-terminal LVHLVDDKMH/C
Intein C-terminal GN/SRSVGPYSLI
Accession No. ABU88269.1 in NCBI/protein
Intein aa Sequence >gi|156619181|gb|ABU88269.1| Fte RPB2 intein (including -1 and +1 extein residues)
HCLTPDHDVLTAEGWLPIQKVSLSNKIATLDKNGELVYQNPTKLHHYEDFCGPLYFITNKNLSLLVTLNHRM
YVKKGEIPGASFDGFELIEAKNLVGKHFKYLKKATWGKEDFNFFLPSLKSYSFFFPNIQVDMNAWLTFFGLW
VTKGRVVNKIRISSSTLEISTKKTLLERICQVELTLTKPRIVNSLENSVQKLGYSYKIQKKKFIIRNKQLWT
YLKPLSVGGLKKSLPPWAWELSQKQARLLLEAMCLGSGTLHFSFQKEGERNSLSYHTKSIKLADDVMRLALH
AGWSANKSLFRKKGTKGKLRNGRVILSKFDLWCLSILKEKNTPAVNSGQKEEKKDQIEQVLQYKGKVFCLSV
PNEVFYVRRIGLPVWTGNS
Block A CLTPDHDVLTAEG 13
Block B NLSLLVTLNHRMYV 73
Block C FFGLWVTKG 147
Block D KKSLPPWA 233
Block E
Block H TKSIKLADDVMRLALHAGW 290
Block F KVFCLSV***PNEVFY 365
Block G LPVWTGNS 378
Initially Contributed by Claude Lemieux
Contributor's Address Departement de biochimie et de microbiologie
Universite Laval
Quebec (QC) Canada G1K 7P4
Contributor's Phone No. (418) 656-2131 ext. 5171
Contributor's FAX No. (418) 656-7176
Contributor's Email address claude.lemieux@rsvs.ulaval.ca
Independently Found By
Comments
Date Submitted 05/12/2007
References Turmel 2008

Last database update: 11/05/10

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