| Intein Name |
Fte RPB2 (RpoB) |
| Prototype Allele |
Cst RPB2 |
| Extein Name |
DNA-directed RNA polymerase beta subunit, fragment 2 |
| Intein Class |
Theoretical |
| Organism Name |
Floydiella terrestris, strain UTEX 1709 |
| Organism Description |
Green alga, chloroplast gene, taxon:51328 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
H95 |
| Insert Site Comments |
RPB2-b |
| Intein Size (aa) |
377 |
| Intein N-terminal |
LVHLVDDKMH/C |
| Intein C-terminal |
GN/SRSVGPYSLI |
| Accession No. |
ABU88269.1 in NCBI/protein |
| Intein aa Sequence |
>gi|156619181|gb|ABU88269.1| Fte RPB2 intein (including -1 and +1 extein residues)
HCLTPDHDVLTAEGWLPIQKVSLSNKIATLDKNGELVYQNPTKLHHYEDFCGPLYFITNKNLSLLVTLNHRM
YVKKGEIPGASFDGFELIEAKNLVGKHFKYLKKATWGKEDFNFFLPSLKSYSFFFPNIQVDMNAWLTFFGLW
VTKGRVVNKIRISSSTLEISTKKTLLERICQVELTLTKPRIVNSLENSVQKLGYSYKIQKKKFIIRNKQLWT
YLKPLSVGGLKKSLPPWAWELSQKQARLLLEAMCLGSGTLHFSFQKEGERNSLSYHTKSIKLADDVMRLALH
AGWSANKSLFRKKGTKGKLRNGRVILSKFDLWCLSILKEKNTPAVNSGQKEEKKDQIEQVLQYKGKVFCLSV
PNEVFYVRRIGLPVWTGNS |
| Block A |
CLTPDHDVLTAEG 13 |
| Block B |
NLSLLVTLNHRMYV 73 |
| Block C |
FFGLWVTKG 147 |
| Block D |
KKSLPPWA 233 |
| Block E |
|
| Block H |
TKSIKLADDVMRLALHAGW 290 |
| Block F |
KVFCLSV***PNEVFY 365 |
| Block G |
LPVWTGNS 378 |
| Initially Contributed by |
Claude Lemieux |
| Contributor's Address |
Departement de biochimie et de microbiologie
Universite Laval
Quebec (QC) Canada G1K 7P4 |
| Contributor's Phone No. |
(418) 656-2131 ext. 5171 |
| Contributor's FAX No. |
(418) 656-7176 |
| Contributor's Email address |
claude.lemieux@rsvs.ulaval.ca |
| Independently Found By |
|
| Comments |
|
| Date Submitted |
05/12/2007 |
| References |
Turmel 2008 |
