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Sare DnaB Intein
Intein Name Sare DnaB
Prototype Allele Ssp DnaB
Extein Name DnaB helicase
Intein Class Theoretical
Organism Name Salinispora arenicola CNS-205
Organism Description taxon:391037
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif DOD
Location in Extein G498
Insert Site Comments dnaB-a
Intein Size (aa) 378
Intein N-terminal PQLSDLRESG/C
Intein C-terminal HN/SIEQDADVVI
Accession No. YP_001539798.1 in NCBI/protein,/locus_tag="Sare_5064"
Intein aa Sequence >YP_001539798.1 GI:159040545 | Sare DnaB intein (including -1 and +1 extein residues)
GCLTADTRLIRADTNAEVTLGELLRDGAKDVPVWALDDSLRYTPRTMTHVFPSGRRTVFRMTLASGKHIDATSNHPFLAF
AGWMPLGELSPGTRIAVPRHVPAPLDVRPWADAEVVLLARLVGGRPWAQEQPVRYDLGSVGPHSTESCLPSAVFGLPKRQ
ITLFLRHLWAAGGTVTPNGSRGGRIHLASPSRRILDDVSRLLLRYGITTRLTPGAGTTHRRHHTLDVSGRDDQLRFLREI
GVPGEQSRACARLLAALESRRNNAKVTPVPGEVWSQVREVLTETGVGSRERAVAGGAGTRLGGARLGGGALRKAPVSHSR
LSGIAAVLDTANLDLHATNDVLWDEIVSIESLGERDVYDATVLGTHNFIANGIATHNS
Block A CLTADTRLIRADT 13
Block B GKHIDATSNHPFLA 78
Block C LLARLVGGR 124
Block D
Block E FLRHLWAAGG 172
Block H SPSRRILDDVSRLLLRYGI 206
Block F DVYDATV**LGTHNFI 369
Block G NGIATHNS 377
Initially Contributed by Fran Perler
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Independently Found By
Comments Endo motifs are poorly conserved and spacing suggests deletions in the endo domain
Date Submitted 11/03/2008
References

Last database update: 11/05/10

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