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Ssp-PCC7002 DnaE-n Intein
Intein Name Ssp-PCC7002 DnaE-n
Prototype Allele Ssp DnaE-n
Extein Name DnaE pol subunit, DNA polymerase III alpha subunit
Intein Class Experimental
Organism Name Synechocystis species, strain PCC 7002
Organism Description Cyanobacterium, taxon: 32049
Domain of Life Eubacteria
Endonuclease Activity
Endo Motif None
Location in Extein Y775
Insert Site Comments dnaE-a, Beta and tau binding domains
Intein Size (aa) 123
Intein N-terminal FDQMVKFAEY/C
Intein C-terminal AN/CFNKSHSTAY
Accession No. YP_001734655.1 in NCBI/protein,/locus_tag="SYNPCC7002_A1408", A1408 in Cyanobase
Intein aa Sequence >YP_001735617.1 GI:170078979 | Ssp-PCC7002 DnaE-n N-terminal intein fragment (including -1 extein residue)
YCLAGGTPVVTVEYGVLPIQTIVEQELLCHVYSVDAQGLIYAQLIEQWHQRGDRLLYEYELENGQMIRATPDHRFLTTTG
ELLPIDEIFTQNLDLAAWAVPDSLPRTA
Block A CLAGGTPVVTVEY N13
Block B GQMIRATPDHRFLT N76
Block C None
Block D None
Block E None
Block H None
Block F
Block G
Initially Contributed by Gerrit Volkmann
Contributor's Address
Contributor's Phone No.
Contributor's FAX No.
Contributor's Email address gr996166@dal.ca
Independently Found By
Comments The genome of Synechococcus ssp. PCC7002 seems devoid of any other inteins found frequently in cyanobacteria (e.g. in dnaB, gyrB or dnaX genes)(GV).
Date Submitted 04/10/2010
References

Last database update: 11/05/10

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