| Intein Name |
Pno RPA2 |
| Prototype Allele |
|
| Extein Name |
DNA-directed RNA polymerase I |
| Intein Class |
Theoretical |
| Organism Name |
Phaeosphaeria nodorum SN15 |
| Organism Description |
Fungi,taxon:321614 |
| Domain of Life |
Eucarya |
| Endonuclease Activity |
|
| Endo Motif |
|
| Location in Extein |
Q? |
| Insert Site Comments |
RPA-a, Q691 of C. albicans XP_720354 |
| Intein Size (aa) |
456 |
| Intein N-terminal |
FNQSPRNMYQ/C |
| Intein C-terminal |
GN/CQMGKQSMGT |
| Accession No. |
AAGI01000064.1 in NCBI |
| Intein aa Sequence |
>AAGI01000064.1 bp 49105-50471 |Pno RPA2 intein (including -1 and +1 extein residues)
QCLSADHEVLTSTGWKALPAIKDADQVMTLDLQTGTQQWNSVQATTRFAREGSLYRLKSDDMDAVCNESHRWYLNTKDQP
TTYTAFTTQQMLDNQLVALRNSSGKATDQWNHESGTTTHTNHNIPTVGHNGNVMFSWPDCPWLPREFVADEACNLDWCRF
IGLVMGDGSIDHVTDAQGQEHYSIQIHQRAGNPASNANTEDVLERLAAKLPNFVVHPSCVSGAEEKHTWTINHRDMYHFF
LPMMRGPQSYDPLDNAMCRTYQAPDYQALSRSDNEPIIPVPADWKTGNWWHLRRWINYPWLFSLAQSQARAMIKGMAAAN
GDWSLSLKARLDTGDSGVVRVFSNSIPLMHDMSVLGLLADTRVNIGVDHKKGQMQLQVPVTMPALLAWCISFSFANSDLA
VAAPKPEAYDNPRHDGFVYCLTVPNGNFLARRTVEYSDNDKIQEVIDAAQKPFFTGNC |
| Block A |
CLSADHEVLTSTG 13 |
| Block B |
DMDAVCNESHRWYL 73 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
EYSDNDKIQEVIDAAQ 449 |
| Block G |
KPFFTGNC 457 |
| Initially Contributed by |
Tim Goodwin, Margi Butler, Russell Poulter |
| Contributor's Address |
Otago University
Dunedin, New Zealand |
| Contributor's Phone No. |
+64 3 4795688 |
| Contributor's FAX No. |
+64 3 4797866 |
| Contributor's Email address |
margi.butler@stonebow.otago.ac.nz |
| Independently Found By |
|
| Comments |
The frameshift within the intein in AAGI01000064.1 is probably a sequencing error based on comparison with GenBank trace arachives sequences (M.B.). |
| Date Submitted |
09/29/2005 |
| References |
|
